Evaluated articles

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In silico evolution of globular protein folds from random sequences

This article has 4 authors:
1. Harutyun Sahakyan
2. Sanasar G. Babajanyan
3. Yuri I. Wolf
4. Eugene V. Koonin
Reviewed by Arcadia Science

This article has 9 evaluationsAppears in 1 listLatest version Nov 10, 2024Latest activity Dec 4, 2024
Non-invasive epidermal proteome assessment-based diagnosis and molecular subclassification of psoriasis and eczematous dermatitis

This article has 9 authors:
1. Michael J. Murphy
2. Gloria Chen
3. Princess Edemobi
4. Muhammad H. Junejo
5. A. Mitchel Wride
6. Sarah L. Spaulding
7. Yiwei Wang
8. Jeffrey M. Cohen
9. William Damsky
Reviewed by Arcadia Science

This article has 1 evaluationAppears in 1 listLatest version Sep 25, 2024Latest activity Dec 2, 2024
ConvCGP: A Convolutional Neural Network to Predict Genotypic Values of Rice Traits from Compressed Genome-Wide Polymorphisms

This article has 5 authors:
1. Tanzila Islam
2. Chyon Hae Kim
3. Hiroyuki Shimono
4. Akio Kimura
5. Hiroyoshi Iwata
Reviewed by Arcadia Science

This article has 1 evaluationAppears in 1 listLatest version Nov 21, 2024Latest activity Dec 1, 2024
A Large-Scale Foundation Model for RNA Function and Structure Prediction

This article has 10 authors:
1. Shuxian Zou
2. Tianhua Tao
3. Sazan Mahbub
4. Caleb N. Ellington
5. Robin Algayres
6. Dian Li
7. Yonghao Zhuang
8. Hongyi Wang
9. Le Song
10. Eric P. Xing
Reviewed by Arcadia Science

This article has 2 evaluationsAppears in 1 listLatest version Nov 29, 2024Latest activity Nov 30, 2024
SpotMAX: a generalist framework for multi-dimensional automatic spot detection and quantification

This article has 13 authors:
1. Francesco Padovani
2. Ivana Čavka
3. Ana Rita Rodrigues Neves
4. Cristina Piñeiro López
5. Nada Al-Refaie
6. Leonardo Bolcato
7. Dimitra Chatzitheodoridou
8. Yagya Chadha
9. Xiaofeng A. Su
10. Jette Lengefeld
11. Daphne S. Cabianca
12. Simone Köhler
13. Kurt M. Schmoller
Reviewed by Arcadia Science

This article has 7 evaluationsAppears in 1 listLatest version Nov 19, 2024Latest activity Dec 6, 2024
Miniature: Unsupervised glimpses into multiplexed tissue imaging datasets as thumbnails for data portals

This article has 1 author:
1. Adam J Taylor
Reviewed by Arcadia Science

This article has 1 evaluationAppears in 1 listLatest version Oct 2, 2024Latest activity Nov 27, 2024
Protein Language Models Expose Viral Mimicry and Immune Escape

This article has 2 authors:
1. Dan Ofer
2. Michal Linial
Reviewed by Arcadia Science

This article has 20 evaluationsAppears in 1 listLatest version Mar 15, 2024Latest activity Nov 27, 2024
Pin4 Links Post-transcriptional and Transcriptional Responses to Glucose Starvation in Yeast

This article has 5 authors:
1. Michaela Ristová
2. Katherine Bexley
3. Vadim Shchepachev
4. Atlanta G. Cook
5. David Tollervey
Reviewed by Arcadia Science

This article has 3 evaluationsAppears in 1 listLatest version Nov 15, 2024Latest activity Nov 15, 2024
Exploring evolution to uncover insights into protein mutational stability

This article has 5 authors:
1. Pauline Hermans
2. Matsvei Tsishyn
3. Martin Schwersensky
4. Marianne Rooman
5. Fabrizio Pucci
Reviewed by Arcadia Science

This article has 7 evaluationsAppears in 1 listLatest version Nov 7, 2024Latest activity Nov 15, 2024
A Structural Proteome Screen Identifies Protein Mimicry in Host-Microbe Systems

This article has 4 authors:
1. Gabriel Penunuri
2. Pingting Wang
3. Russell Corbett-Detig
4. Shelbi L Russell
Reviewed by Arcadia Science

This article has 8 evaluationsAppears in 1 listLatest version Apr 13, 2024Latest activity Dec 10, 2024
Oral Boldine Administration Attenuates Glia Activation and Prevents Neuropathic Pain in a Murine Spared Nerve Injury Model

This article has 7 authors:
1. Jiangping Pan
2. Yorley Duarte
3. Christine Chow
4. Carlos A. Toro
5. Juan C. Sáez
6. Christopher P. Cardozo
7. Wei Zhao
Reviewed by Arcadia Science

This article has 2 evaluationsAppears in 1 listLatest version Nov 5, 2024Latest activity Nov 8, 2024
Cytokine-induced reprogramming of human macrophages toward Alzheimer’s disease-relevant molecular and cellular phenotypes in vitro

This article has 7 authors:
1. Anna Podlesny-Drabiniok
2. Carmen Romero-Molina
3. Tulsi Patel
4. Wen Yi See
5. Yiyuan Liu
6. Edoardo Marcora
7. Alison M. Goate
Reviewed by Arcadia Science

This article has 1 evaluationAppears in 1 listLatest version Oct 29, 2024Latest activity Nov 1, 2024
Quantitative phase imaging with temporal kinetics predicts hematopoietic stem cell diversity

This article has 9 authors:
1. Takao Yogo
2. Yuichiro Iwamoto
3. Hans Jiro Becker
4. Takaharu Kimura
5. Ayano Sugiyama-Finnis
6. Tomomasa Yokomizo
7. Toshio Suda
8. Sadao Ota
9. Satoshi Yamazaki
Reviewed by Arcadia Science

This article has 1 evaluationAppears in 1 listLatest version Sep 30, 2024Latest activity Nov 1, 2024
Deep generative design of neutralizing nanobodies against SARS-CoV-2 variants

This article has 6 authors:
1. Liyun Huo
2. Tian Tian
3. Yanqin Xu
4. Qin Qin
5. Xinyi Jiang
6. Qiang Huang
Reviewed by Arcadia Science

This article has 1 evaluationAppears in 1 listLatest version Oct 30, 2024Latest activity Nov 1, 2024
Integer programming framework for pangenome-based genome inference

This article has 6 authors:
1. Ghanshyam Chandra
2. Md Helal Hossen
3. Stephan Scholz
4. Alexander T Dilthey
5. Daniel Gibney
6. Chirag Jain
Reviewed by Arcadia Science

This article has 2 evaluationsAppears in 1 listLatest version Oct 29, 2024Latest activity Nov 1, 2024
Secreted phospholipase PLA2G12A-driven lysophospholipid signaling via lipolytic modification of extracellular vesicles facilitates pathogenic Th17 differentiation

This article has 22 authors:
1. Chika Mochizuki
2. Yoshitaka Taketomi
3. Atsushi Irie
4. Kuniyuki Kano
5. Yuki Nagasaki
6. Yoshimi Miki
7. Takashi Ono
8. Yasumasa Nishito
9. Takahiro Nakajima
10. Yuri Tomabechi
11. Kazuharu Hanada
12. Mikako Shirouzu
13. Takashi Watanabe
14. Kosuke Hata
15. Yoshihiro Izumi
16. Takeshi Bamba
17. Jerold Chun
18. Kai Kudo
19. Ai Kotani
20. Yusuke Endo
21. Junken Aoki
22. Makoto Murakami
Reviewed by Arcadia Science

This article has 3 evaluationsAppears in 1 listLatest version Oct 29, 2024Latest activity Nov 1, 2024
Raman flow cytometry using time delay integration

This article has 9 authors:
1. Matthew Lindley
2. Toshiki Kubo
3. Stéphanie Devineau
4. Menglu Li
5. Jing Qiao
6. Takuya Yashiro
7. Shiroh Iwanaga
8. Kazuyo Moro
9. Katsumasa Fujita
Reviewed by Arcadia Science

This article has 5 evaluationsAppears in 1 listLatest version Oct 18, 2024Latest activity Nov 1, 2024
Prey attraction in a generalist microbial predator, Dictyostelium discoideum

This article has 4 authors:
1. P. M. Shreenidhi
2. Rachel I. McCabe
3. David C. Queller
4. Joan E. Strassmann
Reviewed by Arcadia Science

This article has 7 evaluationsAppears in 1 listLatest version Oct 21, 2024Latest activity Nov 1, 2024
Applied tutorial for the design and fabrication of biomicrofluidic devices by resin 3D printing

This article has 3 authors:
1. Hannah.B. Musgrove
2. Megan.A. Catterton
3. Rebecca.R. Pompano
Reviewed by Arcadia Science

This article has 1 evaluationAppears in 3 listsLatest version May 1, 2022Latest activity Nov 1, 2024
Evaluation of Machine Learning-Assisted Directed Evolution Across Diverse Combinatorial Landscapes

This article has 6 authors:
1. Francesca-Zhoufan Li
2. Jason Yang
3. Kadina E. Johnston
4. Emre Gürsoy
5. Yisong Yue
6. Frances H. Arnold
Reviewed by Arcadia Science

This article has 10 evaluationsAppears in 1 listLatest version Oct 24, 2024Latest activity Nov 1, 2024

Evaluated articles

In silico evolution of globular protein folds from random sequences

Non-invasive epidermal proteome assessment-based diagnosis and molecular subclassification of psoriasis and eczematous dermatitis

ConvCGP: A Convolutional Neural Network to Predict Genotypic Values of Rice Traits from Compressed Genome-Wide Polymorphisms

A Large-Scale Foundation Model for RNA Function and Structure Prediction

SpotMAX: a generalist framework for multi-dimensional automatic spot detection and quantification

Miniature: Unsupervised glimpses into multiplexed tissue imaging datasets as thumbnails for data portals

Protein Language Models Expose Viral Mimicry and Immune Escape

Pin4 Links Post-transcriptional and Transcriptional Responses to Glucose Starvation in Yeast

Exploring evolution to uncover insights into protein mutational stability

A Structural Proteome Screen Identifies Protein Mimicry in Host-Microbe Systems

Oral Boldine Administration Attenuates Glia Activation and Prevents Neuropathic Pain in a Murine Spared Nerve Injury Model

Cytokine-induced reprogramming of human macrophages toward Alzheimer’s disease-relevant molecular and cellular phenotypes in vitro

Quantitative phase imaging with temporal kinetics predicts hematopoietic stem cell diversity

Deep generative design of neutralizing nanobodies against SARS-CoV-2 variants

Integer programming framework for pangenome-based genome inference

Secreted phospholipase PLA2G12A-driven lysophospholipid signaling via lipolytic modification of extracellular vesicles facilitates pathogenic Th17 differentiation

Raman flow cytometry using time delay integration

Prey attraction in a generalist microbial predator, Dictyostelium discoideum

Applied tutorial for the design and fabrication of biomicrofluidic devices by resin 3D printing

Evaluation of Machine Learning-Assisted Directed Evolution Across Diverse Combinatorial Landscapes