Evaluated articles

Identification of neuron-glia signaling feedback in human schizophrenia using patient-derived, mix-and-match forebrain assembloids

1. Eunjee Kim
2. Yunhee Kim
3. Soojung Hong
4. Inha Kim
5. Juhee Lee
6. Kwanghwan Lee
7. Myungmo An
8. Sung-Yon Kim
9. Sanguk Kim
10. Kunyoo Shin

Reviewed by Arcadia Science

ProtSpace: a tool for visualizing protein space

1. Tobias Senoner
2. Tobias Olenyi
3. Michael Heinzinger
4. Anton Spannagl
5. George Bouras
6. Burkhard Rost
7. Ivan Koludarov

Reviewed by Arcadia Science

Hepatic HKDC1 Deletion Alleviates Western Diet-Induced MASH in Mice

1. Kai Xu
2. Irene Covila-Corona
3. María Dolores Frutos
4. María Ángeles Núñez-Sánchez
5. Dhruvi Makhanasa
6. Pratham Viral Shah
7. Grace Guzman
8. Bruno Ramos-Molina
9. Medha Priyadarshini
10. Md. Wasim Khan

Reviewed by PREreview, Arcadia Science

The Effects of Nonlinear Signal on Expression-Based Prediction Performance

1. Benjamin J. Heil
2. Jake Crawford
3. Casey S. Greene

Reviewed by Arcadia Science, Review Commons

Layilin Regulates Treg Motility and Suppressive Capacity in Skin

1. Victoire Gouirand
2. Sean Clancy
3. Courtney Macon
4. Jose Valle
5. Mariela Pauli
6. Hong-An Troung
7. Jarish Cohen
8. Maxime Kinet
9. Margaret M Lowe
10. Samuel J Lord
11. Kristen Skruber
12. Hobart Harris
13. Esther Kim
14. Isaac Neuhaus
15. Karin Reif
16. Ali A Zarrin
17. Dyche R Mullins
18. Michael D Rosenblum

• Curated by eLife

  eLife Assessment

  This study reports valuable findings on the role of Layilin in the motility and suppressive capacity of clonal expanded regulatory T cells (Tregs) in the skin. Although the strength of the study is utilizing conditional knock-out mice and human skin samples, the analysis of the molecular mechanism by which Layilin affects Treg function is incomplete. The study will be of interest to medical scientists working on skin immunology.

Reviewed by eLife, Arcadia Science

Cholinergic waves have a modest influence on the transcriptome of retinal ganglion cells

1. Rachana Deven Somaiya
2. Matthew A. Po
3. Marla B. Feller
4. Karthik Shekhar

Reviewed by Arcadia Science

Rapid Raman spectroscopy-based test for antimicrobial resistance

1. Vladimir Mushenkov
2. Ksenia Zhigalova
3. Pavel Denisov
4. Alexey Gordeev
5. Dmitry Lukyanov
6. Vladimir Kukushkin
7. Tatiana Priputnevich
8. Elena Zavyalova

Reviewed by Arcadia Science

Morphological single-cell analysis of peripheral blood mononuclear cells from 390 healthy blood donors with Blood Cell Painting

1. Caroline Högel-Starck
2. Veera A. Timonen
3. Gantugs Atarsaikhan
4. Isabel Mogollon
5. Minttu Polso
6. Antti Hassinen
7. Jarno Honkanen
8. Julius Soini
9. Tanja Ruokoranta
10. Toveann Ahlnäs
11. Julianna Juvila
12. Juho J. Miettinen
13. Rodosthenis S. Rodosthenous
14. Mikko Arvas
15. FinnGen
16. Caroline A. Heckman
17. Jukka Partanen
18. Mark Daly
19. Aarno Palotie
20. Lassi Paavolainen
21. Vilja Pietiäinen
22. Esa Pitkänen

Reviewed by Arcadia Science

CaBLAM! A high-contrast bioluminescent Ca ²⁺ indicator derived from an engineered Oplophorus gracilirostris luciferase

1. Gerard G. Lambert
2. Emmanuel L. Crespo
3. Jeremy Murphy
4. Daniela Boassa
5. Selena Luong
6. Dmitrijs Celinskis
7. Stephanie Venn
8. Daniel K. Nguyen
9. Junru Hu
10. Brittany Sprecher
11. Maya O. Tree
12. Richard Orcutt
13. Daniel Heydari
14. Aidan B. Bell
15. Albertina Torreblanca-Zanca
16. Ali Hakimi
17. Diane Lipscombe
18. Christopher I. Moore
19. Ute Hochgeschwender
20. Nathan C. Shaner

Reviewed by Arcadia Science

A secreted helminth microRNA suppresses gastrointestinal cell differentiation required for innate immunity

1. Matias G. Perez
2. Victoria Gillan
3. William M. Anderson
4. François Gerbe
5. Fabien Herbert
6. Tom N. McNeilly
7. Rick M. Maizels
8. Philippe Jay
9. Eileen Devaney
10. Collette Britton

Reviewed by Arcadia Science

Virtual staining from bright-field microscopy for label-free quantitative analysis of plant cell structures

1. Manami Ichita
2. Haruna Yamamichi
3. Takumi Higaki

Reviewed by Arcadia Science

Towards community-driven visual proteomics with large-scale cryo-electron tomography of Chlamydomonas reinhardtii

1. Ron Kelley
2. Sagar Khavnekar
3. Ricardo D. Righetto
4. Jessica Heebner
5. Martin Obr
6. Xianjun Zhang
7. Saikat Chakraborty
8. Grigory Tagiltsev
9. Alicia K. Michael
10. Sofie van Dorst
11. Florent Waltz
12. Caitlyn L. McCafferty
13. Lorenz Lamm
14. Simon Zufferey
15. Philippe Van der Stappen
16. Hugo van den Hoek
17. Wojciech Wietrzynski
18. Pavol Harar
19. William Wan
20. John A.G. Briggs
21. Jürgen M. Plitzko
22. Benjamin D. Engel
23. Abhay Kotecha

Reviewed by Arcadia Science

Mapping targetable sites on the human surfaceome for the design of novel binders

1. Petra E. M. Balbi
2. Ahmed Sadek
3. Anthony Marchand
4. Ta-Yi Yu
5. Jovan Damjanovic
6. Sandrine Georgeon
7. Joseph Schmidt
8. Simone Fulle
9. Che Yang
10. Hamed Khakzad
11. Bruno E. Correia

Reviewed by Arcadia Science

Viro3D: a comprehensive database of virus protein structure predictions

1. Ulad Litvin
2. Spyros Lytras
3. Alexander Jack
4. David L Robertson
5. Joe Grove
6. Joseph Hughes

Reviewed by Arcadia Science

Eliminating Aggressive Cancers via PROTAC-like Inducers of Ferroptosis

1. Avital Oknin-Vaisman
2. Deepanjan Panda
3. Rostislav Novak
4. Eliya Bitman-Lotan
5. Nikolett Pahor
6. Yamen Abu Ahmed
7. Guy Kamnesky
8. Markus E. Diefenbacher
9. Ashraf Brik
10. Amir Orian

Reviewed by Arcadia Science

Scaling down for efficiency: Medium-sized protein language models perform well at transfer learning on realistic datasets

1. Luiz C. Vieira
2. Morgan L. Handojo
3. Claus O. Wilke

Reviewed by Arcadia Science

On the variation of structural divergence among residues in enzyme evolution

1. Julian Echave
2. Mathilde Carpentier

Reviewed by Arcadia Science

Quantifying Data Distortion in Bar Graphs in Biological Research

1. Teng-Jui Lin
2. Markita P. Landry

Reviewed by Arcadia Science

Holotomographic microscopy reveals label-free quantitative dynamics of endothelial cells during endothelialization

1. William D. Leineweber
2. Gabriela Acevedo Munares
3. Christian Leycam
4. Juliette Noyer
5. Patrick Jurney

Reviewed by Arcadia Science

Binary Discriminator Facilitates GPT-based Protein Design

1. Zishuo Zeng
2. Rufang Xu
3. Jin Guo
4. Xiaozhou Luo

Reviewed by Arcadia Science