Evaluated articles

Showing page 3 of 38 pages of list content

PARP1 inhibitors regulate PARP1 structure independent of DNA, reducing binding affinity for single strand breaks

This article has 5 authors:
1. Mark Pailing
2. Lotte van Beek
3. Taiana Maia de Oliveira
4. Maria M. Flocco
5. Bart W. Hoogenboom
Reviewed by Arcadia Science

This article has 2 evaluationsAppears in 1 listLatest version Sep 3, 2025Latest activity Sep 4, 2025
Uncovering Developmental Lineages from Single-cell Data with Contrastive Poincaré Maps

This article has 6 authors:
1. Nithya Bhasker
2. Hattie Chung
3. Louis Boucherie
4. Vladislav Kim
5. Stefanie Speidel
6. Melanie Weber
Reviewed by Arcadia Science

This article has 4 evaluationsAppears in 1 listLatest version Aug 27, 2025Latest activity Sep 4, 2025
A Transparent and Generalizable Deep Learning Framework for Genomic Ancestry Prediction

This article has 7 authors:
1. Camille Rochefort-Boulanger
2. Matthew Scicluna
3. Raphaël Poujol
4. Jean-Christophe Grenier
5. Pierre Luc Carrier
6. Sébastien Lemieux
7. Julie G Hussin
Reviewed by Arcadia Science

This article has 1 evaluationAppears in 1 listLatest version Aug 31, 2025Latest activity Aug 31, 2025
Graph Neural Networks for Likelihood-Free Inference in Diversification Models

This article has 8 authors:
1. Amélie Leroy
2. Ismaël Lajaaiti
3. Sophia Lambert
4. Jakub Voznica
5. Maximilian Pichler
6. Hélène Morlon
7. Florian Hartig
8. Laurent Jacob
Reviewed by Arcadia Science

This article has 8 evaluationsAppears in 1 listLatest version Aug 19, 2025Latest activity Aug 29, 2025
Magnetic Affinity-Based Purification of His-Tagged Proteins Using Ni ²⁺ -Functionalized Nanoparticles

This article has 7 authors:
1. Carolina Otonelo
2. Elisa de Sousa
3. Luciana Juncal
4. Pedro Mendoza Zelis
5. Sheila Ons
6. Claudia Rodríguez Torres
7. Carla Layana
Reviewed by Arcadia Science

This article has 8 evaluationsAppears in 1 listLatest version Aug 4, 2025Latest activity Aug 27, 2025
APEX: Automated Protein EXpression in Escherichia coli

This article has 3 authors:
1. Martyna Kasprzyk
2. Michael A. Herrera
3. Giovanni Stracquadanio
Reviewed by Arcadia Science

This article has 1 evaluationAppears in 1 listLatest version Sep 2, 2025Latest activity Aug 27, 2025
OT-Mation: an open-source code for parsing CSV files into python scripts for control of OT-2 liquid handling robotics

This article has 6 authors:
1. Alex Laverick
2. Katherine Convey
3. Catherine Harrison
4. Jenny Tomlinson
5. Jem Stach
6. Thomas P. Howard
Reviewed by Arcadia Science

This article has 1 evaluationAppears in 1 listLatest version Jan 21, 2025Latest activity Aug 15, 2025
Bacterial metabolites induce cell wall remodeling, antifungal resistance, and immune recognition of commensal fungi

This article has 9 authors:
1. Faith Anderson Davis
2. Kalpana Singh
3. Joseph M. Krampen
4. Jaidyn A Bryant
5. Kyla S. Ost
6. Shannon E. Righi
7. Marcy J. Balunas
8. Tuo Wang
9. Teresa R. O’Meara
Reviewed by Arcadia Science

This article has 3 evaluationsAppears in 1 listLatest version Jul 27, 2025Latest activity Aug 11, 2025
Inflammation-Induced Alternative Splicing in Human Endothelial Cells Reveals Genetic Mechanisms of Cardiovascular Disease Risk

This article has 6 authors:
1. Anna K. Golebiewski
2. Lindsey K. Stolze
3. Valentina D. Vazquez
4. Alhan Mehrabi Yazdi
5. Cecilia M. Careaga
6. Casey E. Romanoski
Reviewed by Arcadia Science

This article has 1 evaluationAppears in 2 listsLatest version Aug 2, 2025Latest activity Aug 6, 2025
Unveiling Distinct Neuroimmune Responses in Mouse Models of Cervical Spinal Cord Injury: Hemisection versus Hemicontusion

This article has 6 authors:
1. Wei Chen
2. Lucille Adam
3. Michel-Flutot Pauline
4. Arnaud Mansart
5. Stéphane Vinit
6. Isabelle Vivodtzev
Reviewed by Arcadia Science

This article has 1 evaluationAppears in 1 listLatest version Aug 3, 2025Latest activity Aug 6, 2025
Phenotypic heterogeneity in a batch culture of Chlamydomonas reinhardtii with different light tolerances

This article has 2 authors:
1. Gaganpreet K. Gill
2. Dion G. Durnford
Reviewed by Arcadia Science

This article has 1 evaluationAppears in 1 listLatest version Jul 30, 2025Latest activity Aug 4, 2025
Evolutionary Reasoning Does Not Arise in Standard Usage of Protein Language Models

This article has 5 authors:
1. Yasha Ektefaie
2. Andrew Shen
3. Lavik Jain
4. Maha Farhat
5. Marinka Zitnik
Reviewed by Arcadia Science

This article has 5 evaluationsAppears in 1 listLatest version Jan 22, 2025Latest activity Aug 5, 2025
Selenium protects Emiliania huxleyi algae from a bacterial pathogen by modulating oxidative stress

This article has 3 authors:
1. Roni Beiralas
2. Shira Ben-Asher
3. Einat Segev
Reviewed by Arcadia Science

This article has 1 evaluationAppears in 1 listLatest version Jul 20, 2025Latest activity Aug 1, 2025
Micro𝕊plit: Semantic Unmixing of Fluorescent Microscopy Data

This article has 26 authors:
1. Ashesh Ashesh
2. Federico Carrara
3. Igor Zubarev
4. Vera Galinova
5. Melisande Croft
6. Melissa Pezzotti
7. Daozheng Gong
8. Francesca Casagrande
9. Elisa Colombo
10. Stefania Giussani
11. Elena Restelli
12. Eugenia Cammarota
13. Juan Manuel Battagliotti
14. Nikolai Klena
15. Moises Di Sante
16. Raghabendra Adhikari
17. Daniel Feliciano
18. Gaia Pigino
19. Elena Taverna
20. Oliver Harschnitz
21. Nicola Maghelli
22. Norbert Scherer
23. Damian Edward Dalle Nogare
24. Joran Deschamps
25. Francesco Pasqualini
26. Florian Jug
Reviewed by Arcadia Science

This article has 2 evaluationsAppears in 1 listLatest version Feb 11, 2025Latest activity Aug 1, 2025
Integrated flexible DNA methylation-chromatin segmentation modeling enhances epigenomic state annotation

This article has 6 authors:
1. Nihit Aggarwal
2. Johanna Elena Schmitz
3. Lukas Laufer
4. Sven Rahmann
5. Jörn Walter
6. Abdulrahman Salhab
Reviewed by Arcadia Science

This article has 1 evaluationAppears in 1 listLatest version Jul 27, 2025Latest activity Jul 31, 2025
A knowledge-based distance metric highlights underperformance of variant effect predictors on gain-of-function missense variants

This article has 2 authors:
1. Lukas Gerasimavicius
2. Joseph A. Marsh
Reviewed by Arcadia Science

This article has 1 evaluationAppears in 1 listLatest version Jul 28, 2025Latest activity Jul 31, 2025
Cellpose-SAM: superhuman generalization for cellular segmentation

This article has 3 authors:
1. Marius Pachitariu
2. Michael Rariden
3. Carsen Stringer
Reviewed by Arcadia Science

This article has 7 evaluationsAppears in 1 listLatest version May 1, 2025Latest activity Oct 17, 2025
Machine Learning and Network Analysis to Predict Hypothetical Protein Functions of Aeromonas hydrophila

This article has 7 authors:
1. Harun Pirim
2. Zaidur Rahman
3. Saviz Saei
4. Sangam Gyawali
5. Mohammad Marufuzzaman
6. Nazanin Tajik
7. Hasan Tekedar
Reviewed by Arcadia Science

This article has 1 evaluationAppears in 1 listLatest version Jul 29, 2025Latest activity Jul 29, 2025
A miniaturized, high-throughput buffer-centric method for protein solubility screening

This article has 4 authors:
1. Adrian Svoboda
2. Marina Molineris
3. Tomáš Pluskal
4. Teo Hebra
Reviewed by Arcadia Science

This article has 5 evaluationsAppears in 1 listLatest version Jun 19, 2025Latest activity Jul 28, 2025
Borzoi-informed fine mapping improves causal variant prioritization in complex trait GWAS

This article has 6 authors:
1. Divyanshi Srivastava
2. Anya Korsakova
3. Qingbo Wang
4. Luong Ruiz
5. Han Yuan
6. David R Kelley
Reviewed by Arcadia Science

This article has 1 evaluationAppears in 1 listLatest version Jul 14, 2025Latest activity Jul 25, 2025

Evaluated articles

PARP1 inhibitors regulate PARP1 structure independent of DNA, reducing binding affinity for single strand breaks

Uncovering Developmental Lineages from Single-cell Data with Contrastive Poincaré Maps

A Transparent and Generalizable Deep Learning Framework for Genomic Ancestry Prediction

Graph Neural Networks for Likelihood-Free Inference in Diversification Models

Magnetic Affinity-Based Purification of His-Tagged Proteins Using Ni ²⁺ -Functionalized Nanoparticles

APEX: Automated Protein EXpression in Escherichia coli

OT-Mation: an open-source code for parsing CSV files into python scripts for control of OT-2 liquid handling robotics

Bacterial metabolites induce cell wall remodeling, antifungal resistance, and immune recognition of commensal fungi

Inflammation-Induced Alternative Splicing in Human Endothelial Cells Reveals Genetic Mechanisms of Cardiovascular Disease Risk

Unveiling Distinct Neuroimmune Responses in Mouse Models of Cervical Spinal Cord Injury: Hemisection versus Hemicontusion

Phenotypic heterogeneity in a batch culture of Chlamydomonas reinhardtii with different light tolerances

Evolutionary Reasoning Does Not Arise in Standard Usage of Protein Language Models

Selenium protects Emiliania huxleyi algae from a bacterial pathogen by modulating oxidative stress

Micro𝕊plit: Semantic Unmixing of Fluorescent Microscopy Data

Integrated flexible DNA methylation-chromatin segmentation modeling enhances epigenomic state annotation

A knowledge-based distance metric highlights underperformance of variant effect predictors on gain-of-function missense variants

Cellpose-SAM: superhuman generalization for cellular segmentation

Machine Learning and Network Analysis to Predict Hypothetical Protein Functions of Aeromonas hydrophila

A miniaturized, high-throughput buffer-centric method for protein solubility screening

Borzoi-informed fine mapping improves causal variant prioritization in complex trait GWAS