Arcadia Science

Latest preprint reviews

1. Categorizing prediction modes within low-pLDDT regions of AlphaFold2 structures

   This article has 4 authors:

   1. Christopher J Williams
   2. Vincent B Chen
   3. David C Richardson
   4. Jane S Richardson

   Reviewed by Arcadia Science

2. Open-source cell culture automation system with integrated cell counting for passaging microplate cultures

   This article has 10 authors:

   1. Greg Courville
   2. Shivanshi Vaid
   3. Alexis Toruño
   4. Paul Lebel
   5. Joana P. Cabrera
   6. Preethi Raghavan
   7. Axel Jacobsen
   8. George Bell
   9. Manuel D. Leonetti
   10. Rafael Gómez-Sjöberg

   Reviewed by Arcadia Science

3. Optogenetic actin network assembly on lipid bilayer uncovers the network density-dependent functions of actin-binding proteins

   This article has 2 authors:

   1. Kei Yamamoto
   2. Makito Miyazaki

   Reviewed by Arcadia Science

4. Learning the Shape of Evolutionary Landscapes: Geometric Deep Learning Reveals Hidden Structure in Phenotype-to-Fitness Maps

   This article has 3 authors:

   1. Manuel Razo-Mejia
   2. Madhav Mani
   3. Dmitri A. Petrov

   Reviewed by Arcadia Science

5. AI-Guided Discovery and Optimization of Antimicrobial Peptides Through Species-Aware Language Model

   This article has 4 authors:

   1. Daehun Bae
   2. Minsang Kim
   3. Jiwon Seo
   4. Hojung Nam

   Reviewed by Arcadia Science

6. Divergent organelle allocation in the evolution of sperm gigantism revealed from subcellular quantification of nematode sperm with electron microscopy

   This article has 2 authors:

   1. Rebecca Schalkowski
   2. Asher D. Cutter

   Reviewed by Arcadia Science

7. A platform for lab management, note-keeping and automation

   This article has 3 authors:

   1. Aubin Fleiss
   2. Alexander S. Mishin
   3. Karen S. Sarkisyan

   Reviewed by Arcadia Science

8. De novo design of miniprotein agonists and antagonists targeting G protein-coupled receptors

   This article has 46 authors:

   1. Edin Muratspahić
   2. David Feldman
   3. David E. Kim
   4. Xiangli Qu
   5. Ana-Maria Bratovianu
   6. Paula Rivera-Sánchez
   7. Federica Dimitri
   8. Jason Cao
   9. Brian P. Cary
   10. Matthew J. Belousoff
   11. Peter Keov
   12. Qingchao Chen
   13. Yue Ren
   14. Justyn Fine
   15. Isaac Sappington
   16. Thomas Schlichthaerle
   17. Jason Z. Zhang
   18. Arvind Pillai
   19. Ljubica Mihaljević
   20. Magnus Bauer
   21. Susana Vázquez Torres
   22. Amir Motmaen
   23. Gyu Rie Lee
   24. Long Tran
   25. Xinru Wang
   26. Inna Goreshnik
   27. Dionne K. Vafeados
   28. Justin E. Svendsen
   29. Parisa Hosseinzadeh
   30. Nicolai Lindegaard
   31. Matthäus Brandt
   32. Yann Waltenspühl
   33. Kristine Deibler
   34. Luke Oostdyk
   35. William Cao
   36. Lakshmi Anantharaman
   37. Lance Stewart
   38. Lauren Halloran
   39. Jamie B. Spangler
   40. Patrick M. Sexton
   41. Bryan L. Roth
   42. Brian E. Krumm
   43. Denise Wootten
   44. Christopher G. Tate
   45. Christoffer Norn
   46. David Baker

   Reviewed by Arcadia Science

9. Calpain cleaves the carboxyl terminus of TRPV1 and modulates receptor tachyphylaxis

   This article has 9 authors:

   1. Jinyan Jiang
   2. Xiaochen Wang
   3. Jing Yang
   4. Shuwen Gao
   5. Jixuan Xu
   6. Jiao Liu
   7. Yun Wang
   8. Ping Liang
   9. Ying Zhang

   Reviewed by Arcadia Science

10. From Likelihood to Fitness: Improving Variant Effect Prediction in Protein and Genome Language Models

    This article has 4 authors:

    1. Charles W. J. Pugh
    2. Paulina G. Nuñez-Valencia
    3. Mafalda Dias
    4. Jonathan Frazer

    Reviewed by Arcadia Science