Evaluated articles

Showing page 1 of 45 pages of list content

Characterization of acetate catabolism in Chlamydomonas reinhardtii reveals distinct roles for ACS1 and ACK2 in regulating cell growth and carbon storage

This article has 3 authors:
1. Abdulmajid M. Alrefaie
2. Yi-Ying Lee
3. Yantao Li
Reviewed by Arcadia Science

This article has 1 evaluationAppears in 1 listLatest version Jun 26, 2026Latest activity Aug 3, 2026
A multimodal foundation model linking histopathology and DNA methylation

This article has 9 authors:
1. Dannong Wang
2. Jessica Zhang
3. Chen Chen
4. Wei Zhang
5. Song Wang
6. Yanda Meng
7. Guru Sonpavde
8. Craig Horbinski
9. Yu Tian
Reviewed by Arcadia Science

This article has 3 evaluationsAppears in 1 listLatest version Jun 14, 2026Latest activity Aug 3, 2026
Elucidating enzyme–substrate specificity through co-folding foundation model

This article has 9 authors:
1. Xiwei Cheng
2. Seonghwan Seo
3. Charlie Huh
4. Jihang Chen
5. Songlin Jiang
6. Pengkang Guo
7. Jing-Ke Weng
8. Woo Youn Kim
9. Wengong Jin
Reviewed by Arcadia Science

This article has 6 evaluationsAppears in 1 listLatest version Aug 2, 2026Latest activity Aug 3, 2026
Spatium: A Protein Language Foundation Model for Spatial Proteomics

This article has 6 authors:
1. Tiangang Wang
2. Sijia Wu
3. Liyu Huang
4. Jiajia Liu
5. Kexin Huang
6. Xiaobo Zhou
Reviewed by Arcadia Science

This article has 3 evaluationsAppears in 1 listLatest version Jul 26, 2026Latest activity Aug 3, 2026
Predicting evolutionary rate as a pretraining task improves genome language model representations

This article has 8 authors:
1. Micaela Elisa Consens
2. Kevin K. Yang
3. Jimmy Hall
4. Ashley Mae Conard
5. Bo Wang
6. Lorin Crawford
7. Alan Moses
8. Alex X. Lu
Reviewed by Arcadia Science

This article has 3 evaluationsAppears in 1 listLatest version Feb 4, 2026Latest activity Jul 31, 2026
Phenotypic complexity makes the molecular basis of evolutionary convergence predictable

This article has 3 authors:
1. Daohan Jiang
2. Matt Pennell
3. Lauren Sallan
Reviewed by Arcadia Science

This article has 1 evaluationAppears in 1 listLatest version Mar 5, 2026Latest activity Jun 5, 2026
Eukaryotic domestication of a bacterial immune protein following horizontal transfer

This article has 12 authors:
1. Edward M. Culbertson
2. Emily Cruz-Lorenzo
3. Jocelyn Leon Padilla
4. Megan Halfmann
5. James R. Drurey
6. Jeffrey J. Lange
7. Yao Li
8. Neha Garlapati
9. Harshitha Gompa
10. Benjamin R. Morehouse
11. Randal Halfmann
12. Tera C. Levin
Reviewed by Arcadia Science

This article has 1 evaluationAppears in 1 listLatest version May 1, 2026Latest activity Jun 4, 2026
Convergent responses to light stress in oligohymenophorean ciliates bearing green algal symbionts

This article has 4 authors:
1. Joseph Kelly
2. Niklas Futterknecht
3. Sven Ernst
4. Lutz Becks
Reviewed by Arcadia Science

This article has 2 evaluationsAppears in 1 listLatest version May 27, 2026Latest activity Jun 3, 2026
ppGpp regulates transcription elongation via direct and indirect inputs to RNA polymerase pausing and nucleotide addition

This article has 11 authors:
1. Andreas U. Mueller
2. Rachel A. Mooney
3. Michael D. Engstrom
4. Yu Bao
5. Michael B. Wolfe
6. Balendra Sah
7. Jonathan Buscher
8. Jason Saba
9. James Liu
10. Seth A. Darst
11. Robert Landick
Reviewed by Arcadia Science

This article has 1 evaluationAppears in 1 listLatest version May 14, 2026Latest activity May 28, 2026
Muscular dystrophy-associated lamin variants disrupt cellular organization through a nucleolar-ribosomal axis controlling cytoplasmic macromolecular crowding

This article has 5 authors:
1. Xiangyi Ding
2. Sweta Kumari
3. Ellen Gregory
4. Daniel A. Starr
5. G. W. Gant Luxton
Reviewed by Arcadia Science

This article has 4 evaluationsAppears in 1 listLatest version Sep 23, 2025Latest activity May 26, 2026
Simple Electroporation of Chlamydomonas reinhardtii Strains with an Intact Cell Wall

This article has 7 authors:
1. Maximilian Meßmer
2. Félix de Carpentier
3. Ezekiel Lam
4. Meggie Hong
5. Setsuko Wakao
6. Michael Schroda
7. Krishna K. Niyogi
Reviewed by Arcadia Science

This article has 4 evaluationsAppears in 1 listLatest version May 5, 2026Latest activity May 18, 2026
Additive baselines furnish no evidence for epistasis learning by MULTI-evolve

This article has 3 authors:
1. Gian Marco Visani
2. Aayush Verma
3. William S. DeWitt
Reviewed by Arcadia Science

This article has 2 evaluationsAppears in 1 listLatest version Apr 24, 2026Latest activity May 18, 2026
The Sniffbot: A biohybrid robot for active sensing-based odor localization and discrimination

This article has 7 authors:
1. Neta Shvil
2. Noa Gozin
3. Anton Sheinin
4. Omer Yuval
5. Yossi Yovel
6. Ben Meir Maoz
7. Amir Ayali
Reviewed by Arcadia Science

This article has 1 evaluationAppears in 1 listLatest version Jun 1, 2026Latest activity May 15, 2026
GRAF1-dependent endocytotic processes and the Golgi apparatus contribute to novel intermediate stages of early ciliogenesis

This article has 10 authors:
1. Kerstin N. Schmidt
2. Korbinian Buerger
3. Olga Maier
4. Anita Zügner
5. Larissa Osten
6. Helga Othmen
7. Yulia Zaytseva
8. Anita Hecht
9. Reinhard Rachel
10. Ralph Witzgall
Reviewed by Arcadia Science

This article has 1 evaluationAppears in 1 listLatest version Apr 5, 2026Latest activity May 8, 2026
ADAPT-M: A workflow for rapid, quantitative in vitro measurements of enriched protein libraries

This article has 9 authors:
1. Carla P. Perez
2. Nicole V. DelRosso
3. Cameron L. Noland
4. Udit Parekh
5. Christian A. Choe
6. Raphael R. Eguchi
7. Qi Wen
8. Polly M. Fordyce
9. Po-Ssu Huang
Reviewed by Arcadia Science

This article has 5 evaluationsAppears in 1 listLatest version Oct 22, 2025Latest activity May 6, 2026
Generalizable Cysteine Quantification in Pea Cultivars from SERS Spectra Using AI

This article has 7 authors:
1. Elham Gorgannejad
2. Qian Liu
3. Catherine Rui Jin Findlay
4. Mohammad Nadimi
5. Alex Chun-Te Ko
6. Pankaj Bhowmik
7. Jitendra Paliwal
Reviewed by Arcadia Science

This article has 3 evaluationsAppears in 1 listLatest version Mar 24, 2026Latest activity May 4, 2026
Rapid and quantitative phage susceptibility test by ramanome

This article has 11 authors:
1. Xiao Han
2. Xiaofu Wan
3. Yang Zhou
4. Xiaoting Fu
5. Xiaoshan Zheng
6. Bo Gao
7. Shi Huang
8. Anle Ge
9. Jiadong Huang
10. Hongzhou Lu
11. Jian Xu
Reviewed by Arcadia Science

This article has 3 evaluationsAppears in 1 listLatest version May 21, 2026Latest activity May 4, 2026
Predicting targeted- and immunotherapeutic response outcomes in melanoma with single-cell Raman spectroscopy and AI

This article has 19 authors:
1. Kai Chang
2. Mamatha Serasanambati
3. Baba Ogunlade
4. Hsiu-Ju Hsu
5. James Agolia
6. Ariel Stiber
7. Jeffrey Gu
8. Jay Chadokiya
9. Grayson E. Rodriguez
10. Prabhjeet Singh
11. Saurabh Sharma
12. Amanda Gonçalves
13. Ojasvi Verma
14. Fareeha Safir
15. Nhat Vu
16. K. Christopher Garcia
17. Daniel Delitto
18. Amanda Kirane
19. Jennifer A. Dionne
Reviewed by Arcadia Science

This article has 4 evaluationsAppears in 1 listLatest version May 21, 2025Latest activity May 4, 2026
A protein interactome for the last eukaryotic common ancestor illuminates the biochemical basis of modern genetic diseases

This article has 16 authors:
1. Rachael M. Cox
2. Ophelia Papoulas
3. Shirlee Shril
4. Chanjae Lee
5. Tynan Gardner
6. Zoya Ansari
7. Anna M. Battenhouse
8. Muyoung Lee
9. Kevin Drew
10. Claire D. McWhite
11. David Yang
12. Janelle C. Leggere
13. Dannie Durand
14. Friedhelm Hildebrandt
15. John B. Wallingford
16. Edward M. Marcotte
Reviewed by Arcadia Science

This article has 5 evaluationsAppears in 1 listLatest version May 29, 2024Latest activity May 1, 2026
A molecular grammar for environmental sensitivity in intrinsically disordered protein regions

This article has 9 authors:
1. C Enriquez-Toledo
2. CA Ponce-Diego
3. GR Lopez-Herrera
4. K Nguyen
5. EE Rodríguez
6. S Biswas
7. S Barron-Huerta
8. TC Boothby
9. CL Cuevas-Velazquez
Reviewed by Arcadia Science

This article has 2 evaluationsAppears in 1 listLatest version Apr 22, 2026Latest activity May 1, 2026

Evaluated articles

Characterization of acetate catabolism in Chlamydomonas reinhardtii reveals distinct roles for ACS1 and ACK2 in regulating cell growth and carbon storage

A multimodal foundation model linking histopathology and DNA methylation

Elucidating enzyme–substrate specificity through co-folding foundation model

Spatium: A Protein Language Foundation Model for Spatial Proteomics

Predicting evolutionary rate as a pretraining task improves genome language model representations

Phenotypic complexity makes the molecular basis of evolutionary convergence predictable

Eukaryotic domestication of a bacterial immune protein following horizontal transfer

Convergent responses to light stress in oligohymenophorean ciliates bearing green algal symbionts

ppGpp regulates transcription elongation via direct and indirect inputs to RNA polymerase pausing and nucleotide addition

Muscular dystrophy-associated lamin variants disrupt cellular organization through a nucleolar-ribosomal axis controlling cytoplasmic macromolecular crowding

Simple Electroporation of Chlamydomonas reinhardtii Strains with an Intact Cell Wall

Additive baselines furnish no evidence for epistasis learning by MULTI-evolve

The Sniffbot: A biohybrid robot for active sensing-based odor localization and discrimination

GRAF1-dependent endocytotic processes and the Golgi apparatus contribute to novel intermediate stages of early ciliogenesis

ADAPT-M: A workflow for rapid, quantitative in vitro measurements of enriched protein libraries

Generalizable Cysteine Quantification in Pea Cultivars from SERS Spectra Using AI

Rapid and quantitative phage susceptibility test by ramanome

Predicting targeted- and immunotherapeutic response outcomes in melanoma with single-cell Raman spectroscopy and AI

A protein interactome for the last eukaryotic common ancestor illuminates the biochemical basis of modern genetic diseases

A molecular grammar for environmental sensitivity in intrinsically disordered protein regions