Evaluated articles

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Graph transformer for ancient ancestry inference

This article has 4 authors:
1. Cole Shanks
2. David Bonet
3. Marçal Comajoan Cara
4. Alexander Ioannidis
Reviewed by Arcadia Science

This article has 1 evaluationAppears in 1 listLatest version Apr 7, 2026Latest activity Apr 27, 2026
Flow molecular dynamics simulations reveal mechanosensitive regulation of von Willebrand factor through glycan-modulated autoinhibitory modules

This article has 3 authors:
1. Naveen E. Louis
2. Yunduo C. Zhao
3. Lining A. Ju
Reviewed by Arcadia Science

This article has 4 evaluationsAppears in 1 listLatest version Apr 7, 2026Latest activity Apr 27, 2026
Towards a Cytometry Foundation Model: Interpretable Sample-level Predictive Modelling via Pretrained Transformers

This article has 4 authors:
1. Zixin Zhuang
2. Benjamin S. Mashford
3. Liang Zheng
4. T. Daniel Andrews
Reviewed by Arcadia Science

This article has 7 evaluationsAppears in 1 listLatest version Apr 2, 2026Latest activity Apr 27, 2026
Benchmarking Agentic Large Language Models for Complex Protein-Set Functional Annotation

This article has 1 author:
1. Xiaoyu Zhang
Reviewed by Arcadia Science

This article has 4 evaluationsAppears in 1 listLatest version Apr 21, 2026Latest activity Apr 27, 2026
Enabling the prediction of phage receptor specificity from genome data

This article has 14 authors:
1. Lucas Moriniere
2. Avery J. C. Noonan
3. Alexey Kazakov
4. Melina Pena
5. Madeline Svab
6. Edwin O. Rivera-Lopez
7. Flavien Maucourt
8. Milo S. Johnson
9. Simon Roux
10. Britt Koskella
11. Adam M. Deutschbauer
12. Edward G. Dudley
13. Vivek K. Mutalik
14. Adam P. Arkin
Reviewed by Arcadia Science

This article has 2 evaluationsAppears in 1 listLatest version Apr 2, 2026Latest activity Apr 22, 2026
Pseudomonas aeruginosa deploys competitor-specific antagonistic strategies

This article has 3 authors:
1. Ziyang Chen
2. Ned S. Wingreen
3. Zemer Gitai
Reviewed by Arcadia Science

This article has 1 evaluationAppears in 1 listLatest version Apr 17, 2026Latest activity Apr 22, 2026
Label-free assessment of pre-implantation embryo quality by the Fluorescence Lifetime Imaging Microscopy (FLIM)-phasor approach

This article has 6 authors:
1. Ning Ma
2. Nabora Reyes de Mochel
3. Paula Duyen Pham
4. Tae Yeon Yoo
5. Ken W. Y. Cho
6. Michelle A. Digman
Reviewed by Arcadia Science

This article has 2 evaluationsAppears in 1 listLatest version Sep 13, 2019Latest activity Apr 22, 2026
Cellulose Synthase Complexes and Remorins Mediate Stress Resilience Through Cell Wall-Plasma Membrane Attachments

This article has 13 authors:
1. Yue Rui
2. Magda Zaoralova
3. William P. Dwyer
4. Andres V. Reyes
5. Tarabryn S. Grismer
6. Nikolaj B. Abel
7. Dharanidaran Jayachandran
8. Shishir P.S. Chundawat
9. Thomas Ott
10. Joseph J. Kieber
11. Peter Dahlberg
12. Shou-Ling Xu
13. Jose Ramon Dinneny
Reviewed by Arcadia Science

This article has 1 evaluationAppears in 1 listLatest version Aug 2, 2025Latest activity Apr 22, 2026
A global metagenomic atlas uncovers ubiquitous biosynthetic potential linked to adaptation in extreme environments

This article has 11 authors:
1. Rubing Du
2. Ruolin He
3. Qi Qian
4. Zhen Li
5. Qiyong Tang
6. Zhidong Zhang
7. Xinming Xu
8. Haoran Peng
9. Jun Liu
10. Marnix H. Medema
11. Qing Xu
Reviewed by Arcadia Science

This article has 2 evaluationsAppears in 1 listLatest version Apr 20, 2026Latest activity Apr 21, 2026
BioReason-Pro: Advancing Protein Function Prediction with Multimodal Biological Reasoning

This article has 34 authors:
1. Adibvafa Fallahpour
2. Arman Seyed-Ahmadi
3. Parsa Idehpour
4. Omar Ibrahim
5. Purav Gupta
6. Jack Naimer
7. Kevin Zhu
8. Arnav Shah
9. Shihao Ma
10. Abhinav Adduri
11. Talu Güloglu
12. Nuo Liu
13. Haotian Cui
14. Arihant Jain
15. Max de Castro
16. Amirfaham Fallahpour
17. Antonio Cembellin-Prieto
18. John S. Stiles
19. Filip Nemčko
20. Alexander A. Nevue
21. Hyungseok C. Moon
22. Lucas Sosnick
23. Olivia Markham
24. Haonan Duan
25. Michelle Y. Y. Lee
26. Andrea F. M. Salvador
27. Chris J. Maddison
28. Christoph A. Thaiss
29. Chiara Ricci-Tam
30. Brian S. Plosky
31. Dave P. Burke
32. Patrick D. Hsu
33. Hani Goodarzi
34. Bo Wang
Reviewed by Arcadia Science

This article has 2 evaluationsAppears in 1 listLatest version Mar 20, 2026Latest activity Apr 20, 2026
Multi-agent reasoning enables predictive design of living materials

This article has 20 authors:
1. Yewei Xiao
2. Xi Zeng
3. Zhaoxiang Yang
4. Junwei Gu
5. Yujie Wang
6. Huilin Wen
7. Mingdong Chen
8. Yanhong Lu
9. Zhipeng Huang
10. Junwei Hu
11. Jiaojiao Liu
12. Chengxiang Sha
13. Jinhui Xie
14. Huan Li
15. Xiang Zhu
16. Shenchi Zheng
17. Weijie Zong
18. Ying Xu
19. Fei Li
20. Ziyi Yu
Reviewed by Arcadia Science

This article has 1 evaluationAppears in 1 listLatest version Feb 16, 2026Latest activity Apr 20, 2026
Starvation-induced autophagy occurs independently of the ATG1 complex in Chlamydomonas

This article has 7 authors:
1. Yong Zou
2. Yixin Wu
3. Simon Stael
4. Panagiotis N. Moschou
5. Xiaohong Zhuang
6. Elena A. Minina
7. Peter V. Bozhkov
Reviewed by Arcadia Science

This article has 1 evaluationAppears in 1 listLatest version Mar 25, 2026Latest activity Apr 16, 2026
Chemically responsive protein switches for the precise control of biological activities

This article has 5 authors:
1. Jaime Franco Pinto
2. Naama Drahy
3. Séverine Divoux
4. Franck Perez
5. Arnaud Gautier
Reviewed by Arcadia Science

This article has 1 evaluationAppears in 1 listLatest version May 21, 2025Latest activity Apr 15, 2026
Multi-omics studies reveal how ambient temperature changes govern cellular responses of Chlamydomonas

This article has 14 authors:
1. Prateek Shetty
2. Trang Vuong
3. Chulin Li
4. Volker Wagner
5. Dinara Myrzakhmetova
6. Chia-Chi Peng
7. Wenshuang Li
8. Joel Ching
9. Ariane Zander
10. Sophie Weiser
11. Miriam A. Rosenbaum
12. Rosalind J Allen
13. Markus Lakemeyer
14. Maria Mittag
Reviewed by Arcadia Science

This article has 1 evaluationAppears in 1 listLatest version Aug 21, 2025Latest activity Apr 13, 2026
Chlamydomonas γ-tubulin mutations reveal a critical role for γ-TuRC in maintaining the stability of centriolar microtubules

This article has 11 authors:
1. Yuki Nakazawa
2. Naoto Kubota
3. Mao Horii
4. Akira Noga
5. Yoshikazu Koike
6. Hiroko Kawai-Toyooka
7. Hideo Dohra
8. Katsushi Yamaguchi
9. Shuji Shigenobu
10. Ken-ichi Wakabayashi
11. Masafumi Hirono
Reviewed by Arcadia Science

This article has 1 evaluationAppears in 1 listLatest version Mar 19, 2025Latest activity Apr 11, 2026
Phase separation behavior of TDP-43 governs its protein interactome and regulation of alternative splicing

This article has 11 authors:
1. Yelyzaveta Zadorozhna
2. Federico Uliana
3. Emanuele Zippo
4. Anke Busch
5. Niklas Kretschmer
6. Simone Mosna
7. Yongwon Suk
8. Jiaxuan Chen
9. Carla Schmidt
10. Lukas Stelzl
11. Dorothee Dormann
Reviewed by Arcadia Science

This article has 3 evaluationsAppears in 1 listLatest version Apr 7, 2026Latest activity Apr 10, 2026
Branched chain fatty acid-rich diet promotes lipid droplet enlargement and impacts organismal health in Caenorhabditis elegans

This article has 7 authors:
1. Kam Ue Roy Li
2. Wing Ka Lo
3. Meigui Yang
4. Chenyin Wang
5. Lau Chun Yin
6. Jetty Chung-Yung Lee
7. Chaogu Zheng
Reviewed by Arcadia Science

This article has 3 evaluationsAppears in 1 listLatest version Jan 20, 2025Latest activity Apr 8, 2026
Macrophage extracellular traps promote maladaptive cardiac remodelling and heart failure via PAD4-dependent mechanisms

This article has 14 authors:
1. Shohei Ichimura
2. Tomofumi Misaka
3. Satoshi Okochi
4. Ryo Ogawara
5. Yu Sato
6. Shunsuke Miura
7. Tetsuro Yokokawa
8. Saori Miura
9. Koki Ueda
10. Masayoshi Oikawa
11. Akiomi Yoshihisa
12. Kazuhiko Ikeda
13. Takafumi Ishida
14. Yasuchika Takeishi
Reviewed by Arcadia Science

This article has 1 evaluationAppears in 1 listLatest version Mar 18, 2026Latest activity Apr 7, 2026
Neonatal liver niches program T cell tolerance

This article has 29 authors:
1. Eva-Lena Stange
2. Trong-Hieu Nguyen
3. Dustyn Mendoza
4. Aiara Lobo Gomes
5. Marlene Sophia Kohlhepp
6. Jonas Pes
7. Shahed Al Bounny
8. Julian Brueck
9. Yunus Cetiner
10. Urs Moerbe
11. Milas Ugur
12. Cristina Kalbermatter
13. Jarrett Lopez-Scarim
14. Aline Dupont
15. Susan A. V. Jennings
16. Julia Heckmann
17. Aaron Silva-Sanchez
18. Solveig Runge
19. Christoph Kuppe
20. Oliver Pabst
21. Thomas Clavel
22. Dorothee Viemann
23. Stephan P. Rosshart
24. Vuk Cerovic
25. Stephanie C. Ganal-Vonarburg
26. Adrien Guillot
27. Eva Billerbeck
28. Mathias W. Hornef
29. Natalia Torow
Reviewed by PREreview, Arcadia Science

This article has 2 evaluationsAppears in 2 listsLatest version Jan 13, 2026Latest activity Apr 26, 2026
The gift of novelty: repeat-robust k -mer-based estimators of mutation rates

This article has 2 authors:
1. Haonan Wu
2. Paul Medvedev
Reviewed by Arcadia Science

This article has 1 evaluationAppears in 1 listLatest version Apr 5, 2026Latest activity Apr 7, 2026

Evaluated articles

Graph transformer for ancient ancestry inference

Flow molecular dynamics simulations reveal mechanosensitive regulation of von Willebrand factor through glycan-modulated autoinhibitory modules

Towards a Cytometry Foundation Model: Interpretable Sample-level Predictive Modelling via Pretrained Transformers

Benchmarking Agentic Large Language Models for Complex Protein-Set Functional Annotation

Enabling the prediction of phage receptor specificity from genome data

Pseudomonas aeruginosa deploys competitor-specific antagonistic strategies

Label-free assessment of pre-implantation embryo quality by the Fluorescence Lifetime Imaging Microscopy (FLIM)-phasor approach

Cellulose Synthase Complexes and Remorins Mediate Stress Resilience Through Cell Wall-Plasma Membrane Attachments

A global metagenomic atlas uncovers ubiquitous biosynthetic potential linked to adaptation in extreme environments

BioReason-Pro: Advancing Protein Function Prediction with Multimodal Biological Reasoning

Multi-agent reasoning enables predictive design of living materials

Starvation-induced autophagy occurs independently of the ATG1 complex in Chlamydomonas

Chemically responsive protein switches for the precise control of biological activities

Multi-omics studies reveal how ambient temperature changes govern cellular responses of Chlamydomonas

Chlamydomonas γ-tubulin mutations reveal a critical role for γ-TuRC in maintaining the stability of centriolar microtubules

Phase separation behavior of TDP-43 governs its protein interactome and regulation of alternative splicing

Branched chain fatty acid-rich diet promotes lipid droplet enlargement and impacts organismal health in Caenorhabditis elegans

Macrophage extracellular traps promote maladaptive cardiac remodelling and heart failure via PAD4-dependent mechanisms

Neonatal liver niches program T cell tolerance

The gift of novelty: repeat-robust k -mer-based estimators of mutation rates