1. Hallmarks of Alpha- and Betacoronavirus non-structural protein 7+8 complexes

    This article has 13 authors:
    1. Boris Krichel
    2. Ganesh Bylapudi
    3. Christina Schmidt
    4. Clement Blanchet
    5. Robin Schubert
    6. Lea Brings
    7. Martin Koehler
    8. Renato Zenobi
    9. Dmitri Svergun
    10. Kristina Lorenzen
    11. Ramakanth Madhugiri
    12. John Ziebuhr
    13. Charlotte Uetrecht

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  2. Decreased Interfacial Dynamics Caused by the N501Y Mutation in the SARS-CoV-2 S1 Spike:ACE2 Complex

    This article has 3 authors:
    1. Wesam S. Ahmed
    2. Angelin M. Philip
    3. Kabir H. Biswas

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  3. S494 O-glycosylation site on the SARS-CoV-2 RBD affects the virus affinity to ACE2 and its infectivity; a molecular dynamics study

    This article has 4 authors:
    1. Shadi Rahnama
    2. Maryam Azimzadeh Irani
    3. Mehriar Amininasab
    4. Mohammad Reza Ejtehadi

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  4. Inhibitor binding influences the protonation states of histidines in SARS-CoV-2 main protease

    This article has 19 authors:
    1. Anna Pavlova
    2. Diane L. Lynch
    3. Isabella Daidone
    4. Laura Zanetti-Polzi
    5. Micholas Dean Smith
    6. Chris Chipot
    7. Daniel W. Kneller
    8. Andrey Kovalevsky
    9. Leighton Coates
    10. Andrei A. Golosov
    11. Callum J. Dickson
    12. Camilo Velez-Vega
    13. José S. Duca
    14. Josh V. Vermaas
    15. Yui Tik Pang
    16. Atanu Acharya
    17. Jerry M. Parks
    18. Jeremy C. Smith
    19. James C. Gumbart

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  5. Environmental Dependence of the Structure of the C-terminal Domain of the SARS-CoV-2 Envelope Protein

    This article has 7 authors:
    1. Kundlik Gadhave
    2. Ankur Kumar
    3. Prateek Kumar
    4. Shivani K. Kapuganti
    5. Neha Garg
    6. Michele Vendruscolo
    7. Rajanish Giri

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  6. Beyond Shielding: The Roles of Glycans in the SARS-CoV-2 Spike Protein

    This article has 12 authors:
    1. Lorenzo Casalino
    2. Zied Gaieb
    3. Jory A. Goldsmith
    4. Christy K. Hjorth
    5. Abigail C. Dommer
    6. Aoife M. Harbison
    7. Carl A. Fogarty
    8. Emilia P. Barros
    9. Bryn C. Taylor
    10. Jason S. McLellan
    11. Elisa Fadda
    12. Rommie E. Amaro

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  7. ACE2 glycans preferentially interact with the RBD of SARS-CoV-2 over SARS-CoV

    This article has 5 authors:
    1. Atanu Acharya
    2. Diane L. Lynch
    3. Anna Pavlova
    4. Yui Tik Pang
    5. James C. Gumbart

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  8. Dynamic Profiling of Binding and Allosteric Propensities of the SARS-CoV-2 Spike Protein with Different Classes of Antibodies: Mutational and Perturbation-Based Scanning Reveals the Allosteric Duality of Functionally Adaptable Hotspots

    This article has 4 authors:
    1. Gennady Verkhivker
    2. Steve Agajanian
    3. Deniz Oztas
    4. Grace Gupta

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  9. Comparative Perturbation-Based Modeling of the SARS-CoV-2 Spike Protein Binding with Host Receptor and Neutralizing Antibodies: Structurally Adaptable Allosteric Communication Hotspots Define Spike Sites Targeted by Global Circulating Mutations

    This article has 4 authors:
    1. Gennady M. Verkhivker
    2. Steve Agajanian
    3. Deniz Yazar Oztas
    4. Grace Gupta

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  10. Transformations, Lineage Comparisons, and Analysis of Down-to-Up Protomer States of Variants of the SARS-CoV-2 Prefusion Spike Protein, Including the UK Variant B.1.1.7

    This article has 4 authors:
    1. Michael H. Peters
    2. Oscar Bastidas
    3. Daniel S. Kokron
    4. Christopher E. Henze

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