SARS-CoV-2 NSP1 C-terminal (residues 131–180) is an intrinsically disordered region in isolation
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SciScore for 10.1101/2020.09.10.290932: (What is this?)
Please note, not all rigor criteria are appropriate for all manuscripts.
Table 1: Rigor
NIH rigor criteria are not applicable to paper type.Table 2: Resources
Software and Algorithms Sentences Resources 2.2 Phylogenetic analysis of SARS-CoV-2 on the basis of NSP1: The full length and aligned sequences fasta files were obtained after blastp search. blastpsuggested: (BLASTP, RRID:SCR_001010)The phylogenetic tree was constructed to locate the taxonomic position of the SARS-CoV-2 NSP1 using MEGA analysis tool v5. MEGAsuggested: (Mega BLAST, RRID:SCR_011920)Further, the NSP1 (50 residues) were studied with Clustal Omega tool to reveal their conserved sequences and represented with the help of ESPript 3.0. Clustal Omegasuggested: (Clustal Omega, RRID:SCR_001591)Results from OddPub: We did not …
SciScore for 10.1101/2020.09.10.290932: (What is this?)
Please note, not all rigor criteria are appropriate for all manuscripts.
Table 1: Rigor
NIH rigor criteria are not applicable to paper type.Table 2: Resources
Software and Algorithms Sentences Resources 2.2 Phylogenetic analysis of SARS-CoV-2 on the basis of NSP1: The full length and aligned sequences fasta files were obtained after blastp search. blastpsuggested: (BLASTP, RRID:SCR_001010)The phylogenetic tree was constructed to locate the taxonomic position of the SARS-CoV-2 NSP1 using MEGA analysis tool v5. MEGAsuggested: (Mega BLAST, RRID:SCR_011920)Further, the NSP1 (50 residues) were studied with Clustal Omega tool to reveal their conserved sequences and represented with the help of ESPript 3.0. Clustal Omegasuggested: (Clustal Omega, RRID:SCR_001591)Results from OddPub: We did not detect open data. We also did not detect open code. Researchers are encouraged to share open data when possible (see Nature blog).
Results from LimitationRecognizer: An explicit section about the limitations of the techniques employed in this study was not found. We encourage authors to address study limitations.Results from TrialIdentifier: No clinical trial numbers were referenced.
Results from Barzooka: We did not find any issues relating to the usage of bar graphs.
Results from JetFighter: We did not find any issues relating to colormaps.
Results from rtransparent:- Thank you for including a conflict of interest statement. Authors are encouraged to include this statement when submitting to a journal.
- Thank you for including a funding statement. Authors are encouraged to include this statement when submitting to a journal.
- No protocol registration statement was detected.
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