Bioinformatics
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To assemble or not to resemble—A validated Comparative Metatranscriptomics Workflow (CoMW)
This article has 4 authors:Reviewed by GigaScience
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PathwayMatcher: proteoform-centric network construction enables fine-granularity multi-omics pathway mapping
This article has 9 authors:Reviewed by GigaScience
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A Galaxy-based training resource for single-cell RNA-seq quality control and analyses
This article has 6 authors:Reviewed by GigaScience
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Arteria: An automation system for a sequencing core facility
This article has 10 authors:Reviewed by GigaScience
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Accessible and reproducible mass spectrometry imaging data analysis in Galaxy
This article has 10 authors:Reviewed by GigaScience
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Benchmark of long non-coding RNA quantification for RNA sequencing of cancer samples
This article has 4 authors:Reviewed by GigaScience
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GraphClust2: Annotation and discovery of structured RNAs with scalable and accessible integrative clustering
This article has 7 authors:Reviewed by GigaScience
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DENTIST – using long reads for closing assembly gaps at high accuracy
This article has 4 authors:Reviewed by GigaScience
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Sim3C: simulation of HiC and Meta3C proximity ligation sequencing technologies
This article has 2 authors:Reviewed by GigaScience
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Vulcan: Improved long-read mapping and structural variant calling via dual-mode alignment
This article has 5 authors:Reviewed by GigaScience