Bioinformatics

epitopepredict: A tool for integrated MHC binding prediction

This article has 1 author:
1. Damien Farrell
Reviewed by GigaByte

This article has 1 evaluationAppears in 1 listLatest version Feb 7, 2021Latest activity Aug 30, 2021
Maximum likelihood pandemic-scale phylogenetics

This article has 6 authors:
1. Nicola De Maio
2. Prabhav Kalaghatgi
3. Yatish Turakhia
4. Russell Corbett-Detig
5. Bui Quang Minh
6. Nick Goldman
Reviewed by ScreenIT

This article has 1 evaluationAppears in 1 listLatest version Apr 10, 2023Latest activity Mar 25, 2022
Rapid genotyping of viral samples using Illumina short-read sequencing data

This article has 6 authors:
1. Alex Varadi
2. Eszter Kaszab
3. Gabor Kardos
4. Eszter Prepost
5. Krisztina Szarka
6. Levente Laczko
Reviewed by ScreenIT

This article has 1 evaluationAppears in 1 listLatest version Mar 22, 2022Latest activity Mar 24, 2022
Triku: a feature selection method based on nearest neighbors for single-cell data

This article has 5 authors:
1. Alex M. Ascensión
2. Olga Ibañez-Solé
3. Inaki Inza
4. Ander Izeta
5. Marcos J. Araúzo-Bravo
Reviewed by GigaScience

This article has 3 evaluationsAppears in 1 listLatest version Feb 13, 2021Latest activity Mar 20, 2022
Democratizing data-independent acquisition proteomics analysis on public cloud infrastructures via the Galaxy framework

This article has 6 authors:
1. Matthias Fahrner
2. Melanie Christine Föll
3. Björn Andreas Grüning
4. Matthias Bernt
5. Hannes Röst
6. Oliver Schilling
Reviewed by GigaScience

This article has 2 evaluationsAppears in 1 listLatest version Jan 1, 2022Latest activity Mar 14, 2022
Comparative Analysis of common alignment tools for single cell RNA sequencing

This article has 5 authors:
1. Ralf Schulze Brüning
2. Lukas Tombor
3. Marcel H. Schulz
4. Stefanie Dimmeler
5. David John
Reviewed by GigaScience

This article has 3 evaluationsAppears in 1 listLatest version Feb 16, 2021Latest activity Mar 14, 2022
MBGC: Multiple Bacteria Genome Compressor

This article has 2 authors:
1. Szymon Grabowski
2. Tomasz M. Kowalski
Reviewed by GigaScience

This article has 3 evaluationsAppears in 1 listLatest version Dec 9, 2020Latest activity Mar 14, 2022
ExTaxsI: an exploration tool of biodiversity molecular data

This article has 9 authors:
1. Giulia Agostinetto
2. Anna Sandionigi
3. Adam Chahed
4. Alberto Brusati
5. Elena Parladori
6. Bachir Balech
7. Antonia Bruno
8. Dario Pescini
9. Maurizio Casiraghi
Reviewed by GigaScience

This article has 2 evaluationsAppears in 1 listLatest version Nov 6, 2020Latest activity Mar 14, 2022
Detection of fusion transcripts and their genomic breakpoints from RNA sequencing data

This article has 28 authors:
1. Youri Hoogstrate
2. Malgorzata A. Komor
3. René Böttcher
4. Job van Riet
5. Harmen J. G. van de Werken
6. Stef van Lieshout
7. Ralf Hoffmann
8. Evert van den Broek
9. Anne S. Bolijn
10. Natasja Dits
11. Daoud Sie
12. David van der Meer
13. Floor Pepers
14. Chris H. Bangma
15. Geert J. L. H. van Leenders
16. Marcel Smid
17. Pim French
18. John W.M. Martens
19. Wilbert van Workum
20. Peter J. van der Spek
21. Bart Janssen
22. Eric Caldenhoven
23. Christian Rausch
24. Mark de Jong
25. Andrew P. Stubbs
26. Gerrit A. Meijer
27. Remond J.A. Fijneman
28. Guido Jenster
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version May 17, 2021Latest activity Mar 14, 2022
Linking big biomedical datasets to modular analysis with Portable Encapsulated Projects

This article has 4 authors:
1. Nathan C. Sheffield
2. Michał Stolarczyk
3. Vincent P. Reuter
4. André F. Rendeiro
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version Oct 8, 2020Latest activity Mar 14, 2022

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