Evaluated articles

Showing page 20 of 35 pages of list content

A joint embedding of protein sequence and structure enables robust variant effect predictions

This article has 5 authors:
1. Lasse M. Blaabjerg
2. Nicolas Jonsson
3. Wouter Boomsma
4. Amelie Stein
5. Kresten Lindorff-Larsen
Reviewed by Arcadia Science

This article has 1 evaluationAppears in 1 listLatest version Dec 16, 2023Latest activity Dec 21, 2023
Engram reactivation mimics cellular signatures of fear

This article has 6 authors:
1. Rebecca L. Suthard
2. Ryan A. Senne
3. Michelle D. Buzharsky
4. Anh H. Diep
5. Angela Y. Pyo
6. Steve Ramirez
Reviewed by Arcadia Science

This article has 4 evaluationsAppears in 1 listLatest version Mar 1, 2024Latest activity Dec 18, 2023
FAIR Header Reference genome: a TRUSTworthy standard

This article has 13 authors:
1. Adam Wright
2. Mark D Wilkinson
3. Christopher Mungall
4. Scott Cain
5. Stephen Richards
6. Paul Sternberg
7. Ellen Provin
8. Jonathan L Jacobs
9. Scott Geib
10. Daniela Raciti
11. Karen Yook
12. Lincoln Stein
13. David C Molik
Reviewed by Arcadia Science

This article has 26 evaluationsAppears in 1 listLatest version Mar 27, 2024Latest activity Dec 19, 2023
Predicting phage-bacteria interactions at the strain level from genomes

This article has 14 authors:
1. Baptiste Gaborieau
2. Hugo Vaysset
3. Florian Tesson
4. Inès Charachon
5. Nicolas Dib
6. Juliette Bernier
7. Tanguy Dequidt
8. Héloïse Georjon
9. Olivier Clermont
10. Pascal Hersen
11. Laurent Debarbieux
12. Jean-Damien Ricard
13. Erick Denamur
14. Aude Bernheim
Reviewed by Arcadia Science

This article has 3 evaluationsAppears in 1 listLatest version Nov 22, 2023Latest activity Dec 14, 2023
Chromatin profiling data indicate regulatory mechanisms for differentiation during development in the acoel Hofstenia miamia

This article has 4 authors:
1. Paul Bump
2. Kaitlyn Loubet-Senear
3. Sarah Arnold
4. Mansi Srivastava
Reviewed by Arcadia Science

This article has 10 evaluationsAppears in 1 listLatest version Dec 5, 2023Latest activity Dec 13, 2023
Cell-selective proteomics reveal novel effectors secreted by an obligate intracellular bacterial pathogen

This article has 4 authors:
1. Allen G. Sanderlin
2. Hannah Kurka Margolis
3. Abigail F. Meyer
4. Rebecca L. Lamason
Reviewed by Arcadia Science

This article has 2 evaluationsAppears in 1 listLatest version Jul 18, 2024Latest activity Dec 14, 2023
Arp2/3-dependent endocytosis ensures Cdc42 oscillations by removing Pak1-mediated negative feedback

This article has 6 authors:
1. Marcus A. Harrell
2. Ziyi Liu
3. Bethany F. Campbell
4. Olivia Chinsen
5. Tian Hong
6. Maitreyi Das
Reviewed by Arcadia Science

This article has 10 evaluationsAppears in 1 listLatest version Jul 16, 2024Latest activity Dec 14, 2023
Bidirectional chemogenetic modulation of claustral activity causes altered cortical dynamics

This article has 5 authors:
1. Ryan Zahacy
2. Yonglie Ma
3. Ian R. Winship
4. Jesse Jackson
5. Allen W. Chan
Reviewed by Arcadia Science

This article has 4 evaluationsAppears in 1 listLatest version Nov 11, 2023Latest activity Dec 9, 2023
Characterizing Human KIF1Bß Motor Activity by Single-Molecule Motility Assays and Caenorhabtidis elegans Genetics

This article has 5 authors:
1. Rei Iguchi
2. Tomoki Kita
3. Taisei Watanabe
4. Kyoko Chiba
5. Shinsuke Niwa
Reviewed by Arcadia Science

This article has 3 evaluationsAppears in 1 listLatest version Nov 13, 2023Latest activity Dec 8, 2023
Learning orientation-invariant representations enables accurate and robust morphologic profiling of cells and organelles

This article has 5 authors:
1. James Burgess
2. Jeffrey J. Nirschl
3. Maria-Clara Zanellati
4. Sarah Cohen
5. Serena Yeung
Reviewed by Arcadia Science

This article has 10 evaluationsAppears in 1 listLatest version Dec 12, 2022Latest activity Dec 23, 2023
TNF-alpha promotes cilia elongation via Mixed Lineage Kinases signaling

This article has 4 authors:
1. Amrita Kumari
2. Amada Caliz
3. Shashi Kant
4. Anastassiia Vertii
Reviewed by Arcadia Science

This article has 1 evaluationAppears in 1 listLatest version Dec 1, 2023Latest activity Dec 8, 2023
Integrated genomics provides insights for the evolution of the polyphosphate accumulation trait of Ca. Accumulibacter

This article has 9 authors:
1. Xiaojing Xie
2. Xuhan Deng
3. Liping Chen
4. Jing Yuan
5. Hang Chen
6. Chaohai Wei
7. Xianghui Liu
8. Stefan Wuertz
9. Guanglei Qiu
Reviewed by Arcadia Science

This article has 10 evaluationsAppears in 1 listLatest version Sep 23, 2023Latest activity Dec 9, 2023
Dynamics of the viral community on the surface of a French smear-ripened cheese during maturation and persistence across production years

This article has 5 authors:
1. Thomas Paillet
2. Quentin Lamy-Besnier
3. Clarisse Figueroa
4. Marie-Agnès Petit
5. Eric Dugat-Bony
Reviewed by Rapid Reviews Infectious Diseases, Arcadia Science

This article has 18 evaluationsAppears in 2 listsLatest version Jul 23, 2024Latest activity Jul 1, 2024
Refinement of the “ Candidatus Accumulibacter” Genus Based on a Metagenomic Analysis of Biological Nutrient Removal (BNR) Pilot-Scale Plants Operated with Reduced Aeration

This article has 6 authors:
1. Rachel D. Stewart
2. Kevin S. Myers
3. Carly Amstadt
4. Matt Seib
5. Katherine D. McMahon
6. Daniel R. Noguera
Reviewed by Arcadia Science

This article has 17 evaluationsAppears in 1 listLatest version Nov 21, 2023Latest activity Dec 8, 2023
Commensal skin bacteria exacerbate inflammation and delay skin healing

This article has 4 authors:
1. Veda D. Khadka
2. Laura Markey
3. Magalie Boucher
4. Tami D. Lieberman
Reviewed by Arcadia Science

This article has 6 evaluationsAppears in 1 listLatest version Dec 4, 2023Latest activity Jan 4, 2024
Getting there in one piece: The Rac pathway prevents cell fragmentation in a nonprotrusively migrating leader cell during organogenesis

This article has 3 authors:
1. Noor Singh
2. Karen Jian Li
3. Kacy Lynn Gordon
Reviewed by Arcadia Science

This article has 4 evaluationsAppears in 1 listLatest version Dec 4, 2023Latest activity Dec 8, 2023
A unique cell division protein critical for the assembly of the bacterial divisome

This article has 7 authors:
1. Xiao Chu
2. Lidong Wang
3. Yiheng Zhu
4. Zhengshan Feng
5. Qingtian Guan
6. Lei Song
7. Zhaoqing Luo
This article has been curated by 1 group:
- Curated by eLife
  
  eLife assessment:
  
  This useful study shows that the essential Acinetobacter baumannii gene Aeg1 likely plays an key role in cell division. The strength of the work is the discovery that the depletion of Aeg1 leads to cell filamentation and that gain-of-function mutations in cell division genes FtsB and FtsL rescue the lethality of Aeg1 depletion. However, Aeg1's localization pattern and its requirement for other division proteins' localizations require further characterization of the functionality of fluorescent fusion proteins, fluorescence images of higher quality, and improvements in statistic qualifications, leaving the study' evidence for Aeg1's exact role in cell division incomplete at this time. In conclusion, the critical role of Aeg1 in the assembly of the A. baumannii divisome has yet to be established unambiguously.
Reviewed by eLife, Arcadia Science

This article has 10 evaluationsAppears in 2 listsLatest version Oct 3, 2024Latest activity Aug 16, 2024
Remote loop evolution reveals a complex biological function for chitinase enzymes beyond the active site

This article has 3 authors:
1. Dan Kozome
2. Adnan Sljoka
3. Paola Laurino
Reviewed by Arcadia Science

This article has 3 evaluationsAppears in 1 listLatest version Apr 15, 2024Latest activity Feb 21, 2024
The landscape of tolerated genetic variation in humans and primates

This article has 97 authors:
1. Hong Gao
2. Tobias Hamp
3. Jeffrey Ede
4. Joshua G. Schraiber
5. Jeremy McRae
6. Moriel Singer-Berk
7. Yanshen Yang
8. Anastasia S. D. Dietrich
9. Petko P. Fiziev
10. Lukas F. K. Kuderna
11. Laksshman Sundaram
12. Yibing Wu
13. Aashish Adhikari
14. Yair Field
15. Chen Chen
16. Serafim Batzoglou
17. Francois Aguet
18. Gabrielle Lemire
19. Rebecca Reimers
20. Daniel Balick
21. Mareike C. Janiak
22. Martin Kuhlwilm
23. Joseph D. Orkin
24. Shivakumara Manu
25. Alejandro Valenzuela
26. Juraj Bergman
27. Marjolaine Rousselle
28. Felipe Ennes Silva
29. Lidia Agueda
30. Julie Blanc
31. Marta Gut
32. Dorien de Vries
33. Ian Goodhead
34. R. Alan Harris
35. Muthuswamy Raveendran
36. Axel Jensen
37. Idriss S. Chuma
38. Julie E. Horvath
39. Christina Hvilsom
40. David Juan
41. Peter Frandsen
42. Fabiano R. de Melo
43. Fabrício Bertuol
44. Hazel Byrne
45. Iracilda Sampaio
46. Izeni Farias
47. João Valsecchi do Amaral
48. Mariluce Messias
49. Maria N. F. da Silva
50. Mihir Trivedi
51. Rogerio Rossi
52. Tomas Hrbek
53. Nicole Andriaholinirina
54. Clément J. Rabarivola
55. Alphonse Zaramody
56. Clifford J. Jolly
57. Jane Phillips-Conroy
58. Gregory Wilkerson
59. Christian Abee
60. Joe H. Simmons
61. Eduardo Fernandez-Duque
62. Sree Kanthaswamy
63. Fekadu Shiferaw
64. Dongdong Wu
65. Long Zhou
66. Yong Shao
67. Guojie Zhang
68. Julius D. Keyyu
69. Sascha Knauf
70. Minh D. Le
71. Esther Lizano
72. Stefan Merker
73. Arcadi Navarro
74. Thomas Bataillon
75. Tilo Nadler
76. Chiea Chuen Khor
77. Jessica Lee
78. Patrick Tan
79. Weng Khong Lim
80. Andrew C. Kitchener
81. Dietmar Zinner
82. Ivo Gut
83. Amanda Melin
84. Katerina Guschanski
85. Mikkel Heide Schierup
86. Robin M. D. Beck
87. Govindhaswamy Umapathy
88. Christian Roos
89. Jean P. Boubli
90. Monkol Lek
91. Shamil Sunyaev
92. Anne O’Donnell-Luria
93. Heidi L. Rehm
94. Jinbo Xu
95. Jeffrey Rogers
96. Tomas Marques-Bonet
97. Kyle Kai-How Farh
Reviewed by Arcadia Science

This article has 3 evaluationsAppears in 1 listLatest version Jun 2, 2023Latest activity Dec 1, 2023
Tick extracellular vesicles alter keratinocyte function in the skin epidermis

This article has 26 authors:
1. Liron Marnin
2. Luisa M. Valencia
3. Haikel N. Bogale
4. Hanna J. Laukaitis-Yousey
5. Agustin Rolandelli
6. Camila Rodrigues Ferraz
7. Anya J. O’Neal
8. Axel D. Schmitter-Sánchez
9. Emily Bencosme Cuevas
10. Thu-Thuy Nguyen
11. Brenda Leal-Galvan
12. David M. Rickert
13. M. Tays Mendes
14. Sourabh Samaddar
15. L. Rainer Butler
16. Nisha Singh
17. Francy E. Cabrera Paz
18. Alejandra Wu-Chuang
19. Jonathan D. Oliver
20. Julie M Jameson
21. Ulrike G. Munderloh
22. Adela S. Oliva Chávez
23. Albert Mulenga
24. Sangbum Park
25. David Serre
26. Joao H.F. Pedra
Reviewed by Arcadia Science

This article has 4 evaluationsAppears in 1 listLatest version Jun 10, 2025Latest activity Dec 12, 2023

Evaluated articles

A joint embedding of protein sequence and structure enables robust variant effect predictions

Engram reactivation mimics cellular signatures of fear

FAIR Header Reference genome: a TRUSTworthy standard

Predicting phage-bacteria interactions at the strain level from genomes

Chromatin profiling data indicate regulatory mechanisms for differentiation during development in the acoel Hofstenia miamia

Cell-selective proteomics reveal novel effectors secreted by an obligate intracellular bacterial pathogen

Arp2/3-dependent endocytosis ensures Cdc42 oscillations by removing Pak1-mediated negative feedback

Bidirectional chemogenetic modulation of claustral activity causes altered cortical dynamics

Characterizing Human KIF1Bß Motor Activity by Single-Molecule Motility Assays and Caenorhabtidis elegans Genetics

Learning orientation-invariant representations enables accurate and robust morphologic profiling of cells and organelles

TNF-alpha promotes cilia elongation via Mixed Lineage Kinases signaling

Integrated genomics provides insights for the evolution of the polyphosphate accumulation trait of Ca. Accumulibacter

Dynamics of the viral community on the surface of a French smear-ripened cheese during maturation and persistence across production years

Refinement of the “ Candidatus Accumulibacter” Genus Based on a Metagenomic Analysis of Biological Nutrient Removal (BNR) Pilot-Scale Plants Operated with Reduced Aeration

Commensal skin bacteria exacerbate inflammation and delay skin healing

Getting there in one piece: The Rac pathway prevents cell fragmentation in a nonprotrusively migrating leader cell during organogenesis

A unique cell division protein critical for the assembly of the bacterial divisome

Curated by eLife

Remote loop evolution reveals a complex biological function for chitinase enzymes beyond the active site

The landscape of tolerated genetic variation in humans and primates

Tick extracellular vesicles alter keratinocyte function in the skin epidermis