Evaluated articles

Showing page 19 of 19 pages of list content

ISA API: An open platform for interoperable life science experimental metadata

This article has 21 authors:
1. David Johnson
2. Dominique Batista
3. Keeva Cochrane
4. Robert P Davey
5. Anthony Etuk
6. Alejandra Gonzalez-Beltran
7. Kenneth Haug
8. Massimiliano Izzo
9. Martin Larralde
10. Thomas N Lawson
11. Alice Minotto
12. Pablo Moreno
13. Venkata Chandrasekhar Nainala
14. Claire O'Donovan
15. Luca Pireddu
16. Pierrick Roger
17. Felix Shaw
18. Christoph Steinbeck
19. Ralf J M Weber
20. Susanna-Assunta Sansone
21. Philippe Rocca-Serra
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version Sep 1, 2021Latest activity Jan 3, 2022
RNA-Seq analysis and annotation of a draft blueberry genome assembly identifies candidate genes involved in fruit ripening, biosynthesis of bioactive compounds, and stage-specific alternative splicing

This article has 10 authors:
1. Vikas Gupta
2. April D Estrada
3. Ivory Blakley
4. Rob Reid
5. Ketan Patel
6. Mason D Meyer
7. Stig Uggerhøj Andersen
8. Allan F Brown
9. Mary Ann Lila
10. Ann E Loraine
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version Feb 13, 2015Latest activity Jan 3, 2022
A reference bacterial genome dataset generated on the MinION™ portable single-molecule nanopore sequencer

This article has 3 authors:
1. Joshua Quick
2. Aaron Quinlan
3. Nicholas J Loman
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version Sep 26, 2014Latest activity Jan 3, 2022
A data repository and analysis framework for spontaneous neural activity recordings in developing retina

This article has 6 authors:
1. Stephen John Eglen
2. Michael Weeks
3. Mark Jessop
4. Jennifer Simonotto
5. Tom Jackson
6. Evelyne Sernagor
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version Mar 26, 2014Latest activity Jan 3, 2022
A high-quality genome and comparison of short- versus long-read transcriptome of the palaearctic duck Aythya fuligula (tufted duck)

This article has 20 authors:
1. Ralf C Mueller
2. Patrik Ellström
3. Kerstin Howe
4. Marcela Uliano-Silva
5. Richard I Kuo
6. Katarzyna Miedzinska
7. Amanda Warr
8. Olivier Fedrigo
9. Bettina Haase
10. Jacquelyn Mountcastle
11. William Chow
12. James Torrance
13. Jonathan M D Wood
14. Josef D Järhult
15. Mahmoud M Naguib
16. Björn Olsen
17. Erich D Jarvis
18. Jacqueline Smith
19. Lél Eöry
20. Robert H S Kraus
Reviewed by GigaScience

This article has 3 evaluationsAppears in 1 listLatest version Dec 1, 2021Latest activity Mar 14, 2022
An overview of the National COVID-19 Chest Imaging Database: data quality and cohort analysis

This article has 16 authors:
1. Dominic Cushnan
2. Oscar Bennett
3. Rosalind Berka
4. Ottavia Bertolli
5. Ashwin Chopra
6. Samie Dorgham
7. Alberto Favaro
8. Tara Ganepola
9. Mark Halling-Brown
10. Gergely Imreh
11. Joseph Jacob
12. Emily Jefferson
13. François Lemarchand
14. Daniel Schofield
15. Jeremy C Wyatt
16. NCCID Collaborative
Reviewed by GigaScience, ScreenIT

This article has 2 evaluationsAppears in 2 listsLatest version Nov 1, 2021Latest activity Nov 24, 2021
Population modeling with machine learning can enhance measures of mental health

This article has 6 authors:
1. Kamalaker Dadi
2. Gaël Varoquaux
3. Josselin Houenou
4. Danilo Bzdok
5. Bertrand Thirion
6. Denis Engemann
Reviewed by GigaScience

This article has 2 evaluationsAppears in 1 listLatest version Sep 24, 2021Latest activity Oct 29, 2021
Detection and characterization of low and high genome coverage regions using an efficient running median and a double threshold approach

This article has 4 authors:
1. Dimitri Desvillechabrol
2. Christiane Bouchier
3. Sean Kennedy
4. Thomas Cokelaer
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version Dec 8, 2016Latest activity Oct 26, 2021
Open Humans: A platform for participant-centered research and personal data exploration

This article has 13 authors:
1. Bastian Greshake Tzovaras
2. Misha Angrist
3. Kevin Arvai
4. Mairi Dulaney
5. Vero Estrada-Galiñanes
6. Beau Gunderson
7. Tim Head
8. Dana Lewis
9. Oded Nov
10. Orit Shaer
11. Athina Tzovara
12. Jason Bobe
13. Mad Price Ball
Reviewed by GigaScience

This article has 2 evaluationsAppears in 1 listLatest version Jun 4, 2019Latest activity Sep 13, 2021
Scalable analysis of multi-modal biomedical data

This article has 4 authors:
1. Jaclyn Smith
2. Yao Shi
3. Michael Benedikt
4. Milos Nikolic
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version Sep 1, 2021Latest activity Sep 12, 2021
An efficient and robust laboratory workflow and tetrapod database for larger scale environmental DNA studies

This article has 7 authors:
1. Jan Axtner
2. Alex Crampton-Platt
3. Lisa A Hörig
4. Azlan Mohamed
5. Charles C Y Xu
6. Douglas W Yu
7. Andreas Wilting
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version Apr 1, 2019Latest activity Aug 25, 2021
Comparison of long-read methods for sequencing and assembly of a plant genome

This article has 19 authors:
1. Valentine Murigneux
2. Subash Kumar Rai
3. Agnelo Furtado
4. Timothy J C Bruxner
5. Wei Tian
6. Ivon Harliwong
7. Hanmin Wei
8. Bicheng Yang
9. Qianyu Ye
10. Ellis Anderson
11. Qing Mao
12. Radoje Drmanac
13. Ou Wang
14. Brock A Peters
15. Mengyang Xu
16. Pei Wu
17. Bruce Topp
18. Lachlan J M Coin
19. Robert J Henry
Reviewed by GigaScience

This article has 3 evaluationsAppears in 1 listLatest version Dec 1, 2020Latest activity Aug 29, 2021
Biodiversity genomics of small metazoans: high quality de novo genomes from single specimens of field-collected and ethanol-preserved springtails

This article has 8 authors:
1. Clément Schneider
2. Christian Woehle
3. Carola Greve
4. Cyrille A. D’Haese
5. Magnus Wolf
6. Axel Janke
7. Miklós Bálint
8. Bruno Hüttel
Reviewed by GigaScience

This article has 2 evaluationsAppears in 1 listLatest version Aug 11, 2020Latest activity Aug 17, 2021
EHRtemporalVariability: delineating temporal data-set shifts in electronic health records

This article has 5 authors:
1. Carlos Sáez
2. Alba Gutiérrez-Sacristán
3. Isaac Kohane
4. Juan M García-Gómez
5. Paul Avillach
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version Jul 30, 2020Latest activity Aug 17, 2021
Mantis: flexible and consensus-driven genome annotation

This article has 5 authors:
1. Pedro Queirós
2. Francesco Delogu
3. Oskar Hickl
4. Patrick May
5. Paul Wilmes
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version Jun 1, 2021Latest activity Aug 17, 2021
StoatyDive: Evaluation and classification of peak profiles for sequencing data

This article has 2 authors:
1. Florian Heyl
2. Rolf Backofen
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version Jun 1, 2021Latest activity Aug 15, 2021

Evaluated articles

ISA API: An open platform for interoperable life science experimental metadata

RNA-Seq analysis and annotation of a draft blueberry genome assembly identifies candidate genes involved in fruit ripening, biosynthesis of bioactive compounds, and stage-specific alternative splicing

A reference bacterial genome dataset generated on the MinION™ portable single-molecule nanopore sequencer

A data repository and analysis framework for spontaneous neural activity recordings in developing retina

A high-quality genome and comparison of short- versus long-read transcriptome of the palaearctic duck Aythya fuligula (tufted duck)

An overview of the National COVID-19 Chest Imaging Database: data quality and cohort analysis

Population modeling with machine learning can enhance measures of mental health

Detection and characterization of low and high genome coverage regions using an efficient running median and a double threshold approach

Open Humans: A platform for participant-centered research and personal data exploration

Scalable analysis of multi-modal biomedical data

An efficient and robust laboratory workflow and tetrapod database for larger scale environmental DNA studies

Comparison of long-read methods for sequencing and assembly of a plant genome

Biodiversity genomics of small metazoans: high quality de novo genomes from single specimens of field-collected and ethanol-preserved springtails

EHRtemporalVariability: delineating temporal data-set shifts in electronic health records

Mantis: flexible and consensus-driven genome annotation

StoatyDive: Evaluation and classification of peak profiles for sequencing data