Evaluated articles

Showing page 20 of 22 pages of list content

The first near-complete assembly of the hexaploid bread wheat genome, Triticum aestivum

This article has 6 authors:
1. Aleksey V. Zimin
2. Daniela Puiu
3. Richard Hall
4. Sarah Kingan
5. Bernardo J. Clavijo
6. Steven L. Salzberg
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version Jul 3, 2017Latest activity Jan 13, 2022
Indexcov: fast coverage quality control for whole-genome sequencing

This article has 4 authors:
1. Brent S. Pedersen
2. Ryan L. Collins
3. Michael E. Talkowski
4. Aaron R. Quinlan
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version Jun 9, 2017Latest activity Jan 13, 2022
High precision registration between zebrafish brain atlases using symmetric diffeomorphic normalization

This article has 5 authors:
1. Gregory D. Marquart
2. Kathryn M. Tabor
3. Eric J. Horstick
4. Mary Brown
5. Harold A. Burgess
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version Oct 14, 2016Latest activity Jan 13, 2022
fastBMA: Scalable Network Inference and Transitive Reduction

This article has 6 authors:
1. Ling-Hong Hung
2. Kaiyuan Shi
3. Migao Wu
4. William Chad Young
5. Adrian E. Raftery
6. Ka Yee Yeung
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version Jan 6, 2017Latest activity Jan 13, 2022
Deep Machine Learning provides state-of-the-art performance in image-based plant phenotyping

This article has 12 authors:
1. Michael P. Pound
2. Alexandra J. Burgess
3. Michael H. Wilson
4. Jonathan A. Atkinson
5. Marcus Griffiths
6. Aaron S. Jackson
7. Adrian Bulat
8. yorgos Tzimiropoulos
9. Darren M. Wells
10. Erik H. Murchie
11. Tony P. Pridmore
12. Andrew P. French
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version May 12, 2016Latest activity Jan 13, 2022
iCAVE: an open source tool for immersive 3D visualization of complex biomolecular interaction networks

This article has 6 authors:
1. Vaja Liluashvili
2. Selim Kalayci
3. Eugene Flouder
4. Manda Wilson
5. Aaron Gabow
6. Zeynep H. Gümü
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version Jun 29, 2016Latest activity Jan 13, 2022
A recurrence based approach for validating structural variation using long-read sequencing technology

This article has 3 authors:
1. Xuefang Zhao
2. Alexandra M. Weber
3. Ryan E. Mills
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version Feb 3, 2017Latest activity Jan 13, 2022
A combined meta-barcoding and shotgun metagenomic analysis of spontaneous wine fermentation

This article has 4 authors:
1. Peter R. Sternes
2. Danna Lee
3. Dariusz R. Kutyna
4. Anthony R. Borneman
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version Jun 8, 2017Latest activity Jan 13, 2022
Multi-locus and long amplicon sequencing approach to study microbial diversity at species level using the MinION™ portable nanopore sequencer

This article has 2 authors:
1. Alfonso Benítez-Páez
2. Yolanda Sanz
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version Jun 12, 2017Latest activity Jan 13, 2022
16GT: a fast and sensitive variant caller using a 16-genotype probabilistic model

This article has 3 authors:
1. Ruibang Luo
2. Michael C. Schatz
3. Steven L. Salzberg
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version Feb 24, 2017Latest activity Jan 13, 2022
Kronos: a workflow assembler for genome analytics and informatics

This article has 10 authors:
1. M Jafar Taghiyar
2. Jamie Rosner
3. Diljot Grewal
4. Bruno Grande
5. Rad Aniba
6. Jasleen Grewal
7. Paul C Boutros
8. Ryan D Morin
9. Ali Bashashati
10. Sohrab P Shah
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version Feb 19, 2016Latest activity Jan 13, 2022
Bio-Docklets: Virtualization Containers for Single-Step Execution of NGS Pipelines

This article has 5 authors:
1. Baekdoo Kim
2. Thahmina Ali
3. Carlos Lijeron
4. Enis Afgan
5. Konstantinos Krampis
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version Mar 15, 2017Latest activity Jan 13, 2022
GSuite HyperBrowser: integrative analysis of dataset collections across the genome and epigenome

This article has 24 authors:
1. Boris Simovski
2. Daniel Vodak
3. Sveinung Gundersen
4. Diana Domanska
5. Abdulrahman Azab
6. Lars Holden
7. Marit Holden
8. Ivar Grytten
9. Knut Rand
10. Finn Drabløs
11. Morten Johansen
12. Antonio Mora
13. Christin Lund-Andersen
14. Bastian Fromm
15. Ragnhild Eskeland
16. Odd Stokke Gabrielsen
17. Sigve Nakken
18. Mads Bengtsen
19. Alexander Johan Nederbragt
20. Hildur Sif Thorarensen
21. Johannes Andreas Akse
22. Ingrid Glad
23. Eivind Hovig
24. Geir Kjetil Sandve
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version Aug 3, 2016Latest activity Jan 13, 2022
Enhancing Knowledge Discovery from Cancer Genomics Data with Galaxy

This article has 9 authors:
1. Marco A. Albuquerque
2. Bruno M. Grande
3. Elie J. Ritch
4. Selin Jessa
5. Martin Krzywinski
6. Jasleen K. Grewal
7. Sohrab P. Shah
8. Paul C. Boutros
9. Ryan D. Morin
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version Nov 26, 2016Latest activity Jan 13, 2022
NanoSim: nanopore sequence read simulator based on statistical characterization

This article has 4 authors:
1. Chen Yang
2. Justin Chu
3. René L Warren
4. Inanç Birol
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version Mar 18, 2016Latest activity Jan 13, 2022
de novo assembly and population genomic survey of natural yeast isolates with the Oxford Nanopore MinION sequencer

This article has 16 authors:
1. Benjamin Istace
2. Anne Friedrich
3. Léo d’Agata
4. Sébastien Faye
5. Emilie Payen
6. Odette Beluche
7. Claudia Caradec
8. Sabrina Davidas
9. Corinne Cruaud
10. Gianni Liti
11. Arnaud Lemainque
12. Stefan Engelen
13. Stefan Engelen
14. Patrick Wincker
15. Joseph Schacherer
16. Jean-Marc Aury
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version Jul 28, 2016Latest activity Jan 13, 2022
The Healthy Brain Network Serial Scanning Initiative: A resource for evaluating inter-individual differences and their reliabilities across scan conditions and sessions

This article has 16 authors:
1. David O’Connor
2. Natan Vega Potler
3. Meagan Kovacs
4. Ting Xu
5. Lei Ai
6. John Pellman
7. Tamara Vanderwal
8. Lucas Parra
9. Samantha Cohen
10. Satrajit Ghosh
11. Jasmine Escalera
12. Natalie Grant-Villegas
13. Yael Osman
14. Anastasia Bui
15. R. Cameron Craddock
16. Michael P. Milham
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version Oct 3, 2016Latest activity Jan 4, 2022
The Preprocessed Connectomes Project Repository of Manually Corrected Skull-stripped T1-weighted Anatomical MRI Data

This article has 5 authors:
1. Benjamin Puccio
2. James P Pooley
3. John S Pellman
4. Elise C Taverna
5. R Cameron Craddock
Reviewed by GigaScience

This article has 4 evaluationsAppears in 1 listLatest version Jul 31, 2016Latest activity Mar 14, 2022
Clusterflock: A Flocking Algorithm for Isolating Congruent Phylogenomic Datasets

This article has 7 authors:
1. Apurva Narechania
2. Richard Baker
3. Rob DeSalle
4. Barun Mathema
5. Sergios-Orestis Kolokotronis
6. Barry Kreiswirth
7. Paul J. Planet
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version Mar 25, 2016Latest activity Jan 3, 2022
Circadian rhythms have significant effects on leaf-to-canopy gas exchange under field conditions

This article has 20 authors:
1. Víctor Resco de Dios
2. Arthur Gessler
3. Juan Pedro Ferrio
4. Josu G Alday
5. Michael Bahn
6. Jorge del Castillo
7. Sébastien Devidal
8. Sonia García-Muñoz
9. Zachary Kayler
10. Damien Landais
11. Paula Martín
12. Alexandru Milcu
13. Clément Piel
14. Karin Pirhofer-Walzl
15. Olivier Ravel
16. Serajis Salekin
17. David T Tissue
18. Mark G Tjoelker
19. Jordi Voltas
20. Jacques Roy
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version May 21, 2016Latest activity Jan 3, 2022

Evaluated articles

The first near-complete assembly of the hexaploid bread wheat genome, Triticum aestivum

Indexcov: fast coverage quality control for whole-genome sequencing

High precision registration between zebrafish brain atlases using symmetric diffeomorphic normalization

fastBMA: Scalable Network Inference and Transitive Reduction

Deep Machine Learning provides state-of-the-art performance in image-based plant phenotyping

iCAVE: an open source tool for immersive 3D visualization of complex biomolecular interaction networks

A recurrence based approach for validating structural variation using long-read sequencing technology

A combined meta-barcoding and shotgun metagenomic analysis of spontaneous wine fermentation

Multi-locus and long amplicon sequencing approach to study microbial diversity at species level using the MinION™ portable nanopore sequencer

16GT: a fast and sensitive variant caller using a 16-genotype probabilistic model

Kronos: a workflow assembler for genome analytics and informatics

Bio-Docklets: Virtualization Containers for Single-Step Execution of NGS Pipelines

GSuite HyperBrowser: integrative analysis of dataset collections across the genome and epigenome

Enhancing Knowledge Discovery from Cancer Genomics Data with Galaxy

NanoSim: nanopore sequence read simulator based on statistical characterization

de novo assembly and population genomic survey of natural yeast isolates with the Oxford Nanopore MinION sequencer

The Healthy Brain Network Serial Scanning Initiative: A resource for evaluating inter-individual differences and their reliabilities across scan conditions and sessions

The Preprocessed Connectomes Project Repository of Manually Corrected Skull-stripped T1-weighted Anatomical MRI Data

Clusterflock: A Flocking Algorithm for Isolating Congruent Phylogenomic Datasets

Circadian rhythms have significant effects on leaf-to-canopy gas exchange under field conditions