Latest preprint reviews

1. Genome evolution and transcriptome plasticity associated with adaptation to monocot and eudicot plants in Colletotrichum fungi

   This article has 21 authors:

   1. Riccardo Baroncelli
   2. José F. Cobo-Díaz
   3. Tiziano Benocci
   4. Mao Peng
   5. Evy Battaglia
   6. Sajeet Haridas
   7. William Andreopoulos
   8. Kurt LaButti
   9. Jasmyn Pangilinan
   10. Anna Lipzen
   11. Maxim Koriabine
   12. Diane Bauer
   13. Gaetan Le Floch
   14. Miia R. Mäkelä
   15. Elodie Drula
   16. Bernard Henrissat
   17. Igor V. Grigoriev
   18. Jo Anne Crouch
   19. Ronald P. de Vries
   20. Serenella A. Sukno
   21. Michael R. Thon

   Reviewed by GigaScience

2. Genomic decoding of Theobroma grandiflorum (cupuassu) at chromosomal scale: Evolutionary insights for horticultural innovation

   This article has 14 authors:

   1. Rafael Moysés Alves
   2. Vinicius A. C. de Abreu
   3. Rafaely Pantoja Oliveira
   4. João Victor dos Anjos Almeida
   5. Mauro de Medeiros de Oliveira
   6. Saura R. Silva
   7. Alexandre R. Paschoal
   8. Sintia S. de Almeida
   9. Pedro A. F. de Souza
   10. Jesus A. Ferro
   11. Vitor F. O. Miranda
   12. Antonio Figueira
   13. Douglas S. Domingues
   14. Alessandro M. Varani

   Reviewed by GigaScience

3. ntsm: an alignment-free, ultra low coverage, sequencing technology agnostic, intraspecies sample comparison tool for sample swap detection

   This article has 4 authors:

   1. Justin Chu
   2. Jiazhen Rong
   3. Xiaowen Feng
   4. Heng Li

   Reviewed by GigaScience

4. Exploring polymorphic interspecies structural variants in Eucalyptus: Unravelling Their Role in Reproductive Isolation and Adaptive Divergence

   This article has 7 authors:

   1. Scott Ferguson
   2. Ashley Jones
   3. Kevin Murray
   4. Rose L. Andrew
   5. Helen Bothwell
   6. Benjamin Schwessinger
   7. Justin Borevitz

   Reviewed by GigaScience

5. LRTK: A platform agnostic toolkit for linked-read analysis of both human genomes and metagenomes

   This article has 10 authors:

   1. Chao Yang
   2. Zhenmiao Zhang
   3. Yufen Huang
   4. Xuefeng Xie
   5. Herui Liao
   6. Jin Xiao
   7. Werner Pieter Veldsman
   8. Kejing Yin
   9. Xiaodong Fang
   10. Lu Zhang

   Reviewed by GigaScience

6. Hecatomb: An End-to-End Research Platform for Viral Metagenomics

   This article has 10 authors:

   1. Michael J. Roach
   2. Sarah J. Beecroft
   3. Kathie A. Mihindukulasuriya
   4. Leran Wang
   5. Anne Paredes
   6. Kara Henry-Cocks
   7. Lais Farias Oliveira Lima
   8. Elizabeth A. Dinsdale
   9. Robert A. Edwards
   10. Scott A. Handley

   Reviewed by GigaScience

7. IPEV: Identification of Prokaryotic and Eukaryotic Virus-derived sequences in virome using deep learning

   This article has 7 authors:

   1. Hengchuang Yin
   2. Shufang Wu
   3. Jie Tan
   4. Qian Guo
   5. Mo Li
   6. Xiaoqing Jiang
   7. Huaiqiu Zhu

   Reviewed by GigaScience

8. Korea4K: whole genome sequences of 4,157 Koreans with 107 phenotypes derived from extensive health check-ups

   This article has 29 authors:

   1. Sungwon Jeon
   2. Hansol Choi
   3. Yeonsu Jeon
   4. Whan-Hyuk Choi
   5. Hyunjoo Choi
   6. Kyungwhan An
   7. Hyojung Ryu
   8. Jihun Bhak
   9. Hyeonjae Lee
   10. Yoonsung Kwon
   11. Sukyeon Ha
   12. Yeo Jin Kim
   13. Asta Blazyte
   14. Changjae Kim
   15. Yeonkyung Kim
   16. Younghui Kang
   17. Yeong Ju Woo
   18. Chanyoung Lee
   19. Jeongwoo Seo
   20. Dan Bolser
   21. Orsolya Biro
   22. Eun-Seok Shin
   23. Byung Chul Kim
   24. Seon-Young Kim
   25. Ji-Hwan Park
   26. Jongbum Jeon
   27. Dooyoung Jung
   28. Semin Lee
   29. Jong Bhak

   Reviewed by GigaScience

9. SRY: An Effective Method for Sorting Long Reads of Sex-limited Chromosome

   This article has 4 authors:

   1. Xiao-Bo Wang
   2. Qing-You Liu
   3. A-Lun Li
   4. Jue Ruan

   Reviewed by GigaScience

10. Streamlining remote nanopore data access with slow5curl

    This article has 4 authors:

    1. Bonson Wong
    2. James M. Ferguson
    3. Hasindu Gamaarachchi
    4. Ira W. Deveson

    Reviewed by GigaScience