GigaScience

Latest preprint reviews

1. SODAR: managing multi-omics study data and metadata

   This article has 7 authors:

   1. Mikko Nieminen
   2. Oliver Stolpe
   3. Mathias Kuhring
   4. January Weiner
   5. Patrick Pett
   6. Dieter Beule
   7. Manuel Holtgrewe

   Reviewed by GigaScience

2. MuLan-Methyl - Multiple Transformer-based Language Models for Accurate DNA Methylation Prediction

   This article has 3 authors:

   1. Wenhuan Zeng
   2. Anupam Gautam
   3. Daniel H. Huson

   Reviewed by GigaScience

3. A new haplotype-resolved turkey genome to enable turkey genetics and genomics research

   This article has 8 authors:

   1. Carolina P Barros
   2. Martijn F L Derks
   3. Jeff Mohr
   4. Benjamin J Wood
   5. Richard P M A Crooijmans
   6. Hendrik-Jan Megens
   7. Marco C A M Bink
   8. Martien A M Groenen

   Reviewed by GigaScience

4. Training Infrastructure as a Service

   This article has 14 authors:

   1. Helena Rasche
   2. Cameron Hyde
   3. John Davis
   4. Simon Gladman
   5. Nate Coraor
   6. Anthony Bretaudeau
   7. Gianmauro Cuccuru
   8. Wendi Bacon
   9. Beatriz Serrano-Solano
   10. Jennifer Hillman-Jackson
   11. Saskia Hiltemann
   12. Miaomiao Zhou
   13. Björn Grüning
   14. Andrew Stubbs

   Reviewed by GigaScience

5. EraSOR: Erase Sample Overlap in polygenic score analyses

   This article has 4 authors:

   1. Shing Wan Choi
   2. Timothy Shin Heng Mak
   3. Clive J. Hoggart
   4. Paul F. O’Reilly

   Reviewed by GigaScience

6. FriendlyClearMap: An optimized toolkit for mouse brain mapping and analysis

   This article has 9 authors:

   1. Moritz Negwer
   2. Bram Bosch
   3. Maren Bormann
   4. Rick Hesen
   5. Lukas Lütje
   6. Lynn Aarts
   7. Carleen Rossing
   8. Nael Nadif Kasri
   9. Dirk Schubert

   Reviewed by GigaScience

7. Strategies and techniques for quality control and semantic enrichment with multimodal data: a case study in colorectal cancer with eHDPrep

   This article has 6 authors:

   1. Tom M Toner
   2. Rashi Pancholi
   3. Paul Miller
   4. Thorsten Forster
   5. Helen G Coleman
   6. Ian M Overton

   Reviewed by GigaScience

8. A workflow reproducibility scale for automatic validation of biological interpretation results

   This article has 4 authors:

   1. Hirotaka Suetake
   2. Tsukasa Fukusato
   3. Takeo Igarashi
   4. Tazro Ohta

   Reviewed by GigaScience

9. TF-Prioritizer: a Java pipeline to prioritize condition-specific transcription factors

   This article has 15 authors:

   1. Markus Hoffmann
   2. Nico Trummer
   3. Leon Schwartz
   4. Jakub Jankowski
   5. Hye Kyung Lee
   6. Lina-Liv Willruth
   7. Olga Lazareva
   8. Kevin Yuan
   9. Nina Baumgarten
   10. Florian Schmidt
   11. Jan Baumbach
   12. Marcel H Schulz
   13. David B Blumenthal
   14. Lothar Hennighausen
   15. Markus List

   Reviewed by GigaScience

10. An accessible infrastructure for artificial intelligence using a Docker-based JupyterLab in Galaxy

    This article has 4 authors:

    1. Anup Kumar
    2. Gianmauro Cuccuru
    3. Björn Grüning
    4. Rolf Backofen

    Reviewed by GigaScience