GigaScience

Latest preprint reviews

1. A map of tumor–host interactions in glioma at single-cell resolution

   This article has 16 authors:

   1. Francesca Pia Caruso
   2. Luciano Garofano
   3. Fulvio D'Angelo
   4. Kai Yu
   5. Fuchou Tang
   6. Jinzhou Yuan
   7. Jing Zhang
   8. Luigi Cerulo
   9. Stefano M Pagnotta
   10. Davide Bedognetti
   11. Peter A Sims
   12. Mario Suvà
   13. Xiao-Dong Su
   14. Anna Lasorella
   15. Antonio Iavarone
   16. Michele Ceccarelli

   Reviewed by GigaScience

2. Gene-set Enrichment with Mathematical Biology (GEMB)

   This article has 5 authors:

   1. Amy L Cochran
   2. Kenneth J Nieser
   3. Daniel B Forger
   4. Sebastian Zöllner
   5. Melvin G McInnis

   Reviewed by GigaScience

3. Long-read only assembly of Drechmeria coniospora genomes reveals widespread chromosome plasticity and illustrates the limitations of current nanopore methods

   This article has 6 authors:

   1. Damien Courtine
   2. Jan Provaznik
   3. Jerome Reboul
   4. Guillaume Blanc
   5. Vladimir Benes
   6. Jonathan J Ewbank

   Reviewed by GigaScience

4. A haplotype-resolved, de novo genome assembly for the wood tiger moth ( Arctia plantaginis ) through trio binning

   This article has 11 authors:

   1. Eugenie C Yen
   2. Shane A McCarthy
   3. Juan A Galarza
   4. Tomas N Generalovic
   5. Sarah Pelan
   6. Petr Nguyen
   7. Joana I Meier
   8. Ian A Warren
   9. Johanna Mappes
   10. Richard Durbin
   11. Chris D Jiggins

   Reviewed by GigaScience

5. Scientometric trends for coronaviruses and other emerging viral infections

   This article has 3 authors:

   1. Dima Kagan
   2. Jacob Moran-Gilad
   3. Michael Fire

   Reviewed by GigaScience, ScreenIT

6. Imputing missing RNA-sequencing data from DNA methylation by using a transfer learning–based neural network

   This article has 5 authors:

   1. Xiang Zhou
   2. Hua Chai
   3. Huiying Zhao
   4. Ching-Hsing Luo
   5. Yuedong Yang

   Reviewed by GigaScience

7. Sequence Compression Benchmark (SCB) database—A comprehensive evaluation of reference-free compressors for FASTA-formatted sequences

   This article has 4 authors:

   1. Kirill Kryukov
   2. Mahoko Takahashi Ueda
   3. So Nakagawa
   4. Tadashi Imanishi

   Reviewed by GigaScience

8. Reduced chromatin accessibility underlies gene expression differences in homologous chromosome arms of diploid Aegilops tauschii and hexaploid wheat

   This article has 6 authors:

   1. Fu-Hao Lu
   2. Neil McKenzie
   3. Laura-Jayne Gardiner
   4. Ming-Cheng Luo
   5. Anthony Hall
   6. Michael W Bevan

   Reviewed by GigaScience

9. Draft genome assemblies using sequencing reads from Oxford Nanopore Technology and Illumina platforms for four species of North American Fundulus killifish

   This article has 7 authors:

   1. Lisa K Johnson
   2. Ruta Sahasrabudhe
   3. James Anthony Gill
   4. Jennifer L Roach
   5. Lutz Froenicke
   6. C Titus Brown
   7. Andrew Whitehead

   Reviewed by GigaScience

10. CRISPRcasIdentifier: Machine learning for accurate identification and classification of CRISPR-Cas systems

    This article has 5 authors:

    1. Victor A Padilha
    2. Omer S Alkhnbashi
    3. Shiraz A Shah
    4. André C P L F de Carvalho
    5. Rolf Backofen

    Reviewed by GigaScience