GigaScience

Latest preprint reviews

1. BiSulfite Bolt: A bisulfite sequencing analysis platform

   This article has 5 authors:

   1. Colin Farrell
   2. Michael Thompson
   3. Anela Tosevska
   4. Adewale Oyetunde
   5. Matteo Pellegrini

   Reviewed by GigaScience

2. The germline mutational process in rhesus macaque and its implications for phylogenetic dating

   This article has 11 authors:

   1. Lucie A Bergeron
   2. Søren Besenbacher
   3. Jaco Bakker
   4. Jiao Zheng
   5. Panyi Li
   6. George Pacheco
   7. Mikkel-Holger S Sinding
   8. Maria Kamilari
   9. M Thomas P Gilbert
   10. Mikkel H Schierup
   11. Guojie Zhang

   Reviewed by GigaScience

3. Fluorescence microscopy datasets for training deep neural networks

   This article has 6 authors:

   1. Guy M Hagen
   2. Justin Bendesky
   3. Rosa Machado
   4. Tram-Anh Nguyen
   5. Tanmay Kumar
   6. Jonathan Ventura

   Reviewed by GigaScience

4. Chromatin conformation capture (Hi-C) sequencing of patient-derived xenografts: analysis guidelines

   This article has 7 authors:

   1. Mikhail G Dozmorov
   2. Katarzyna M Tyc
   3. Nathan C Sheffield
   4. David C Boyd
   5. Amy L Olex
   6. Jason Reed
   7. J Chuck Harrell

   Reviewed by GigaScience

5. Synonymous variants that disrupt messenger RNA structure are significantly constrained in the human population

   This article has 8 authors:

   1. Jeffrey B S Gaither
   2. Grant E Lammi
   3. James L Li
   4. David M Gordon
   5. Harkness C Kuck
   6. Benjamin J Kelly
   7. James R Fitch
   8. Peter White

   Reviewed by GigaScience

6. A chromosome-level genome assembly for the Pacific oyster Crassostrea gigas

   This article has 8 authors:

   1. Carolina Peñaloza
   2. Alejandro P Gutierrez
   3. Lél Eöry
   4. Shan Wang
   5. Ximing Guo
   6. Alan L Archibald
   7. Tim P Bean
   8. Ross D Houston

   Reviewed by GigaScience

7. Rapid development of cloud-native intelligent data pipelines for scientific data streams using the HASTE Toolkit

   This article has 10 authors:

   1. Ben Blamey
   2. Salman Toor
   3. Martin Dahlö
   4. Håkan Wieslander
   5. Philip J Harrison
   6. Ida-Maria Sintorn
   7. Alan Sabirsh
   8. Carolina Wählby
   9. Ola Spjuth
   10. Andreas Hellander

   Reviewed by GigaScience

8. Chromosome-level genome assemblies of the malaria vectors Anopheles coluzzii and Anopheles arabiensis

   This article has 10 authors:

   1. Anton Zamyatin
   2. Pavel Avdeyev
   3. Jiangtao Liang
   4. Atashi Sharma
   5. Chujia Chen
   6. Varvara Lukyanchikova
   7. Nikita Alexeev
   8. Zhijian Tu
   9. Max A Alekseyev
   10. Igor V Sharakhov

   Reviewed by GigaScience

9. The case for using mapped exonic non-duplicate reads when reporting RNA-sequencing depth: examples from pediatric cancer datasets

   This article has 17 authors:

   1. Holly C Beale
   2. Jacquelyn M Roger
   3. Matthew A Cattle
   4. Liam T McKay
   5. Drew K A Thompson
   6. Katrina Learned
   7. A Geoffrey Lyle
   8. Ellen T Kephart
   9. Rob Currie
   10. Du Linh Lam
   11. Lauren Sanders
   12. Jacob Pfeil
   13. John Vivian
   14. Isabel Bjork
   15. Sofie R Salama
   16. David Haussler
   17. Olena M Vaske

   Reviewed by GigaScience

10. HTSlib: C library for reading/writing high-throughput sequencing data

    This article has 8 authors:

    1. James K Bonfield
    2. John Marshall
    3. Petr Danecek
    4. Heng Li
    5. Valeriu Ohan
    6. Andrew Whitwham
    7. Thomas Keane
    8. Robert M Davies

    Reviewed by GigaScience