GigaScience

Latest preprint reviews

1. VAPPER: High-throughput variant antigen profiling in African trypanosomes of livestock

   This article has 4 authors:

   1. Sara Silva Pereira
   2. John Heap
   3. Andrew R Jones
   4. Andrew P Jackson

   Reviewed by GigaScience

2. Combining semi-automated image analysis techniques with machine learning algorithms to accelerate large-scale genetic studies

   This article has 6 authors:

   1. Jonathan A. Atkinson
   2. Guillaume Lobet
   3. Manuel Noll
   4. Patrick E. Meyer
   5. Marcus Griffiths
   6. Darren M. Wells

   Reviewed by GigaScience

3. Parallel sequencing lives, or what makes large sequencing projects successful

   This article has 10 authors:

   1. Javier Quilez
   2. Enrique Vidal
   3. François Le Dily
   4. François Serra
   5. Yasmina Cuartero
   6. Ralph Stadhouders
   7. Thomas Graf
   8. Marc A Marti-Renom
   9. Miguel Beato
   10. Guillaume Filion

   Reviewed by GigaScience

4. Morphometric analysis of Passiflora leaves: the relationship between landmarks of the vasculature and elliptical Fourier descriptors of the blade

   This article has 2 authors:

   1. Daniel H. Chitwood
   2. Wagner C. Otoni

   Reviewed by GigaScience

5. Toward A Reproducible, Scalable Framework for Processing Large Neuroimaging Datasets

   This article has 17 authors:

   1. Erik C. Johnson
   2. Miller Wilt
   3. Luis M. Rodriguez
   4. Raphael Norman-Tenazas
   5. Corban Rivera
   6. Nathan Drenkow
   7. Dean Kleissas
   8. Theodore J. LaGrow
   9. Hannah Cowley
   10. Joseph Downs
   11. Jordan Matelsky
   12. Marisa Hughes
   13. Elizabeth Reilly
   14. Brock Wester
   15. Eva Dyer
   16. Konrad Kording
   17. William Gray-Roncal

   Reviewed by GigaScience

6. CNVpytor: a tool for copy number variation detection and analysis from read depth and allele imbalance in whole-genome sequencing

   This article has 5 authors:

   1. Milovan Suvakov
   2. Arijit Panda
   3. Colin Diesh
   4. Ian Holmes
   5. Alexej Abyzov

   Reviewed by GigaScience

7. Building the mega single-cell transcriptome ocular meta-atlas

   This article has 4 authors:

   1. Vinay S Swamy
   2. Temesgen D Fufa
   3. Robert B Hufnagel
   4. David M McGaughey

   Reviewed by GigaScience

8. A chromosome-level genome assembly for the eastern fence lizard ( Sceloporus undulatus ), a reptile model for physiological and evolutionary ecology

   This article has 20 authors:

   1. Aundrea K Westfall
   2. Rory S Telemeco
   3. Mariana B Grizante
   4. Damien S Waits
   5. Amanda D Clark
   6. Dasia Y Simpson
   7. Randy L Klabacka
   8. Alexis P Sullivan
   9. George H Perry
   10. Michael W Sears
   11. Christian L Cox
   12. Robert M Cox
   13. Matthew E Gifford
   14. Henry B John-Alder
   15. Tracy Langkilde
   16. Michael J Angilletta
   17. Adam D Leaché
   18. Marc Tollis
   19. Kenro Kusumi
   20. Tonia S Schwartz

   Reviewed by GigaScience

9. ChronoRoot: High-throughput phenotyping by deep segmentation networks reveals novel temporal parameters of plant root system architecture

   This article has 11 authors:

   1. Nicolás Gaggion
   2. Federico Ariel
   3. Vladimir Daric
   4. Éric Lambert
   5. Simon Legendre
   6. Thomas Roulé
   7. Alejandra Camoirano
   8. Diego H Milone
   9. Martin Crespi
   10. Thomas Blein
   11. Enzo Ferrante

   Reviewed by GigaScience

10. Phylogenetic diversity analysis of shotgun metagenomic reads describes gut microbiome development and treatment effects in the post-weaned pig

    This article has 8 authors:

    1. Daniela Gaio
    2. Matthew Z. DeMaere
    3. Kay Anantanawat
    4. Graeme J. Eamens
    5. Linda Falconer
    6. Toni A. Chapman
    7. Steven Djordjevic
    8. Aaron E. Darling

    Reviewed by GigaScience