GigaScience

Latest preprint reviews

1. Reproducible processing of TCGA regulatory networks

   This article has 10 authors:

   1. Viola Fanfani
   2. Katherine H. Shutta
   3. Panagiotis Mandros
   4. Jonas Fischer
   5. Enakshi Saha
   6. Soel Micheletti
   7. Chen Chen
   8. Marouen Ben Guebila
   9. Camila M. Lopes-Ramos
   10. John Quackenbush

   Reviewed by GigaScience

2. GTestimate: Improving relative gene expression estimation in scRNA-seq using the Good-Turing estimator

   This article has 3 authors:

   1. Martin Fahrenberger
   2. Christopher Esk
   3. Arndt von Haeseler

   Reviewed by GigaScience

3. A high-quality reference genome for the Ural Owl ( Strix uralensis ) enables investigations of cell cultures as a genomic resource for endangered species

   This article has 10 authors:

   1. Ioannis Chrysostomakis
   2. Annika Mozer
   3. Camilla Bruno Di-Nizo
   4. Dominik Fischer
   5. Nafiseh Sargheini
   6. Laura von der Mark
   7. Bruno Huettel
   8. Jonas J. Astrin
   9. Till Töpfer
   10. Astrid Böhne

   Reviewed by GigaScience

4. PathoGFAIR: a collection of FAIR and adaptable (meta)genomics workflows for (foodborne) pathogens detection and tracking

   This article has 5 authors:

   1. Engy Nasr
   2. Anna Henger
   3. Björn Grüning
   4. Paul Zierep
   5. Bérénice Batut

   Reviewed by GigaScience

5. First chromosome-level genome assembly of the colonial tunicate Botryllus schlosseri

   This article has 10 authors:

   1. Olivier De Thier
   2. Mohammed M.Tawfeeq
   3. Roland Faure
   4. Marie Lebel
   5. Philippe Dru
   6. Simon Blanchoud
   7. Alexandre Alié
   8. Federico D. Brown
   9. Jean-François Flot
   10. Stefano Tiozzo

   Reviewed by GigaScience

6. Haplotype-resolved reference genomes of the sea turtle clade unveil ultra-syntenic genomes with hotspots of divergence

   This article has 20 authors:

   1. Larissa S. Arantes
   2. Tom Brown
   3. Diego De Panis
   4. Scott D. Whiting
   5. Erin L. LaCasella
   6. Gabriella A. Carvajal
   7. Adam Kennedy
   8. Deana Edmunds
   9. Blair P. Bentley
   10. Jennifer Balacco
   11. Conor Whelan
   12. Nivesh Jain
   13. Tatiana Tilley
   14. Brian O’Toole
   15. Patrick Traore
   16. Erich D. Jarvis
   17. Oliver Berry
   18. Peter H. Dutton
   19. Lisa M. Komoroske
   20. Camila J. Mazzoni

   Reviewed by GigaScience

7. CNSistent integration and feature extraction from somatic copy number profiles

   This article has 2 authors:

   1. Adam Streck
   2. Roland F. Schwarz

   Reviewed by GigaScience

8. Using synthetic RNA to benchmark poly(A) length inference from direct RNA sequencing

   This article has 8 authors:

   1. Jessie J -Y Chang
   2. Xuan Yang
   3. Haotian Teng
   4. Jianshu Zhang
   5. Benjamin Reames
   6. Shuxin Zhang
   7. Vincent Corbin
   8. Lachlan J M Coin

   Reviewed by GigaScience

9. The Open Pediatric Cancer Project

   This article has 49 authors:

   1. Zhuangzhuang Geng
   2. Eric Wafula
   3. Ryan J Corbett
   4. Yuanchao Zhang
   5. Run Jin
   6. Krutika S Gaonkar
   7. Sangeeta Shukla
   8. Komal S Rathi
   9. Dave Hill
   10. Aditya Lahiri
   11. Daniel P Miller
   12. Alex Sickler
   13. Kelsey Keith
   14. Christopher Blackden
   15. Antonia Chroni
   16. Miguel A Brown
   17. Adam A Kraya
   18. Kaylyn L Clark
   19. Brian R Rood
   20. Adam C Resnick
   21. Nicholas Van Kuren
   22. John M Maris
   23. Alvin Farrel
   24. Mateusz P Koptyra
   25. Gerri R Trooskin
   26. Noel Coleman
   27. Yuankun Zhu
   28. Stephanie Stefankiewicz
   29. Zied Abdullaev
   30. Asif T Chinwalla
   31. Mariarita Santi
   32. Ammar S Naqvi
   33. Jennifer L Mason
   34. Carl J Koschmann
   35. Xiaoyan Huang
   36. Sharon J Diskin
   37. Kenneth Aldape
   38. Bailey K Farrow
   39. Weiping Ma
   40. Bo Zhang
   41. Brian M Ennis
   42. Sarah Tasian
   43. Saksham Phul
   44. Matthew R Lueder
   45. Chuwei Zhong
   46. Joseph M Dybas
   47. Pei Wang
   48. Deanne Taylor
   49. Jo Lynne Rokita

   Reviewed by GigaScience

10. Nanopore- and AI-empowered microbial viability inference

    This article has 19 authors:

    1. Harika Ürel
    2. Sabrina Benassou
    3. Hanna Marti
    4. Tim Reska
    5. Ela Sauerborn
    6. Yuri Pinheiro Alves De Souza
    7. Albert Perlas
    8. Enrique Rayo
    9. Michael Biggel
    10. Stefan Kesselheim
    11. Nicole Borel
    12. Edward J Martin
    13. Constanza B Venegas
    14. Michael Schloter
    15. Kathrin Schröder
    16. Jana Mittelstrass
    17. Simone Prospero
    18. James M Ferguson
    19. Lara Urban

    Reviewed by GigaScience