GigaScience

Latest preprint reviews

1. Characterizing a species-rich and understudied tropical insect fauna using DNA barcoding

   This article has 11 authors:

   1. David R Hemprich-Bennett
   2. Ezekiel Donkor
   3. Bernard Adams
   4. Naana Afua Acquaah
   5. Eva D Ofori
   6. Samuel Anie-Amoah
   7. Abigail Bailey
   8. Hugh Charles J Godfray
   9. Owen T Lewis
   10. Fred Aboagye-Antwi
   11. Talya D Hackett

   Reviewed by GigaScience

2. MADRe: Strain-level metagenomic classification through assembly-driven database reduction

   This article has 4 authors:

   1. Josipa Lipovac
   2. Mile Šikić
   3. Riccardo Vicedomini
   4. Krešimir Križanović

   Reviewed by GigaScience

3. Sex Chromosome Turnover and Structural Interspecific Genome Divergence Shapes Meiotic Outcomes in Hybridizing Cobitis

   This article has 23 authors:

   1. S. A. Schlebusch
   2. V. Trifonov
   3. Z. Halenková
   4. M. Klianitskaya
   5. D. Dedukh
   6. A. Ruiz Herrera
   7. L. Álvarez González
   8. G. Pujol Infantes
   9. E. Hřibová
   10. L. Andjel
   11. O. Bartoš
   12. P. Pajer
   13. T. Tichopád
   14. D. Kulik
   15. J. Kotusz
   16. M. Kaštánková Doležálková
   17. A. Bohne
   18. A. Marta
   19. P. Horna
   20. R. Reifová
   21. Y. Guiguen
   22. J. Pačes
   23. K. Janko

   Reviewed by GigaScience

4. scDenorm: a denormalization tool for integrating single-cell transcriptomics data

   This article has 12 authors:

   1. Yin Huang
   2. Anna Vathrakokoili Pournara
   3. Ying Ao
   4. Ziliang Huang
   5. Hui Zhang
   6. Yongjian Zhang
   7. Sheng Liu
   8. Alvis Brazma
   9. Irene Papatheodorou
   10. Xinlu Yang
   11. Ming Shi
   12. Zhichao Miao

   Reviewed by GigaScience

5. Comparative analysis of eccDNA and circRNA tools shows increased accuracy of tool combination

   This article has 4 authors:

   1. Aitor Zabala
   2. Alex M Ascensión
   3. Iñigo Prada-Luengo
   4. David Otaegui

   Reviewed by GigaScience

6. MIReVTD, a minimum information standard for reporting vector trait data

   This article has 7 authors:

   1. Sadie J Ryan
   2. Paul J Huxley
   3. Catherine A Lippi
   4. Samraat Pawar
   5. Lauren Cator
   6. Samuel S C Rund
   7. Leah R Johnson

   Reviewed by GigaScience

7. Enhanced semantic classification of microbiome sample origins using large language models (LLMs)

   This article has 8 authors:

   1. Daniela Gaio
   2. Janko Tackmann
   3. Eugenio Perez-Molphe-Montoya
   4. Nicolas Näpflin
   5. David Patsch
   6. Lukas Malfertheiner
   7. Matteo Eustachio Peluso
   8. Christian von Mering

   Reviewed by GigaScience

8. Improved genome assembly of whale shark, the world’s biggest fish: revealing “chromocline” in intragenomic heterogeneity

   This article has 3 authors:

   1. Yawako W. Kawaguchi
   2. Rui Matsumoto
   3. Shigehiro Kuraku

   Reviewed by GigaScience

9. Single-nucleus multiple-organ chromatin accessibility mapping in the rat

   This article has 9 authors:

   1. Ronghai Li
   2. Yue Yuan
   3. Shanshan Duan
   4. Qiuting Deng
   5. Wen Ma
   6. Chang Liu
   7. Peng Gao
   8. Li Lu
   9. Chuanyu Liu

   Reviewed by GigaScience

10. An interpretable Graph-Regularized Optimal Transport Framework for Diagonal Single-Cell Integrative Analysis

    This article has 7 authors:

    1. Zexuan Wang
    2. Qipeng Zhan
    3. Shu Yang
    4. Zhuoping Zhou
    5. Mengyuan Kan
    6. Tianhuan Zhai
    7. Li Shen

    Reviewed by GigaScience