Arcadia Science

Latest preprint reviews

1. Recommendations for Uniform Variant Calling of SARS-CoV-2 Genome Sequence across Bioinformatic Workflows

   This article has 26 authors:

   1. Ryan Connor
   2. Migun Shakya
   3. David A. Yarmosh
   4. Wolfgang Maier
   5. Ross Martin
   6. Rebecca Bradford
   7. J. Rodney Brister
   8. Patrick S. G. Chain
   9. Courtney A. Copeland
   10. Julia di Iulio
   11. Bin Hu
   12. Philip Ebert
   13. Jonathan Gunti
   14. Yumi Jin
   15. Kenneth S. Katz
   16. Andrey Kochergin
   17. Tré LaRosa
   18. Jiani Li
   19. Po-E Li
   20. Chien-Chi Lo
   21. Sujatha Rashid
   22. Evguenia S. Maiorova
   23. Chunlin Xiao
   24. Vadim Zalunin
   25. Lisa Purcell
   26. Kim D. Pruitt

   Reviewed by Arcadia Science

2. Evolutionary-scale prediction of atomic-level protein structure with a language model

   This article has 15 authors:

   1. Zeming Lin
   2. Halil Akin
   3. Roshan Rao
   4. Brian Hie
   5. Zhongkai Zhu
   6. Wenting Lu
   7. Nikita Smetanin
   8. Robert Verkuil
   9. Ori Kabeli
   10. Yaniv Shmueli
   11. Allan dos Santos Costa
   12. Maryam Fazel-Zarandi
   13. Tom Sercu
   14. Salvatore Candido
   15. Alexander Rives

   Reviewed by Arcadia Science

3. Transcription-replication interactions reveal principles of bacterial genome regulation

   This article has 10 authors:

   1. Andrew W. Pountain
   2. Peien Jiang
   3. Tianyou Yao
   4. Ehsan Homaee
   5. Yichao Guan
   6. Magdalena Podkowik
   7. Bo Shopsin
   8. Victor J. Torres
   9. Ido Golding
   10. Itai Yanai

   Reviewed by Arcadia Science

4. Genome and life-history evolution link bird diversification to the end-Cretaceous mass extinction

   This article has 15 authors:

   1. Jacob S. Berv
   2. Sonal Singhal
   3. Daniel J. Field
   4. Nathanael Walker-Hale
   5. Sean W. McHugh
   6. J. Ryan Shipley
   7. Eliot T. Miller
   8. Rebecca T. Kimball
   9. Edward L. Braun
   10. Alex Dornburg
   11. C. Tomomi Parins-Fukuchi
   12. Richard O. Prum
   13. Benjamin M. Winger
   14. Matt Friedman
   15. Stephen A. Smith

   Reviewed by Arcadia Science

5. Restriction Endonuclease-Based Modification-Dependent Enrichment (REMoDE) of DNA for Metagenomic Sequencing

   This article has 6 authors:

   1. Syed Usman Enam
   2. Joshua L. Cherry
   3. Susan R. Leonard
   4. Ivan N. Zheludev
   5. David J. Lipman
   6. Andrew Z. Fire

   Reviewed by Arcadia Science

6. Iterative immunostaining combined with expansion microscopy and image processing reveals nanoscopic network organization of nuclear lamina

   This article has 11 authors:

   1. Elina Mäntylä
   2. Toni Montonen
   3. Lucio Azzari
   4. Salla Mattola
   5. Markus Hannula
   6. Maija Vihinen-Ranta
   7. Jari Hyttinen
   8. Minnamari Vippola
   9. Alessandro Foi
   10. Soile Nymark
   11. Teemu O. Ihalainen

   Reviewed by Arcadia Science

7. A novel eukaryotic RdRP-dependent small RNA pathway represses antiviral immunity by controlling an ERK pathway component in the black-legged tick

   This article has 9 authors:

   1. Canran Feng
   2. Kyosuke Torimaru
   3. Mandy Yu Theng Lim
   4. Li-Ling Chak
   5. Masami Shiimori
   6. Kosuke Tsuji
   7. Tetsuya Tanaka
   8. Junko Iida
   9. Katsutomo Okamura

   Reviewed by Arcadia Science

8. Modulation of tooth regeneration through opposing responses to Wnt and BMP signals in teleosts

   This article has 7 authors:

   1. Tyler A. Square
   2. Emma J. Mackey
   3. Shivani Sundaram
   4. Naama C. Weksler
   5. Zoe Z. Chen
   6. Sujanya N. Narayanan
   7. Craig T. Miller

   Reviewed by Arcadia Science

9. Cooperative actin filament nucleation by the Arp2/3 complex and formins maintains the homeostatic cortical array in Arabidopsis epidermal cells

   This article has 4 authors:

   1. Liyuan Xu
   2. Lingyan Cao
   3. Jiejie Li
   4. Christopher J Staiger

   Reviewed by Arcadia Science

10. Effects of interspecies interactions on marine community ecosystem function

    This article has 5 authors:

    1. Michael Daniels
    2. Astrid K.M. Stubbusch
    3. Noelle A. Held
    4. Olga T. Schubert
    5. Martin Ackermann

    Reviewed by Arcadia Science