Molecular Biology

  1. Genome-Wide Characterization of SARS-CoV-2 Cytopathogenic Proteins in the Search of Antiviral Targets

    1. Jiantao Zhang
    2. Qi Li
    3. Ruth S. Cruz Cosme
    4. Volodymyr Gerzanich
    5. Qiyi Tang
    6. J. Marc Simard
    7. Richard Y. Zhao

    Reviewed by ScreenIT

    1 evaluationAppears in 1 listLatest version Latest activity

  2. A DCL3 dicing code within Pol IV-RDR2 transcripts diversifies the siRNA pool guiding RNA-directed DNA methylation

    1. Andrew Loffer
    2. Jasleen Singh
    3. Akihito Fukudome
    4. Vibhor Mishra
    5. Feng Wang
    6. Craig S Pikaard

    • Curated by eLife

      Evaluation Summary:

      The paper is of interest to RNA biologists, especially to those who study small RNAs. The findings deepen our understanding of the rules of DCL3 dicing and explain how 23-nt and 24-nt siRNAs in the RNA-directed DNA methylation pathway are produced. Overall, the data are of high quality and support the paper's conclusions.

      (This preprint has been reviewed by eLife. We include the public reviews from the reviewers here; the authors also receive private feedback with suggested changes to the manuscript. Reviewer #3 agreed to share their name with the authors.)

    Reviewed by eLife

    4 evaluationsAppears in 1 listLatest version Latest activity

  3. Viral E protein neutralizes BET protein-mediated post-entry antagonism of SARS-CoV-2

    1. Irene P. Chen
    2. James E. Longbotham
    3. Sarah McMahon
    4. Rahul K. Suryawanshi
    5. Mir M. Khalid
    6. Taha Y. Taha
    7. Takako Tabata
    8. Jennifer M. Hayashi
    9. Frank W. Soveg
    10. Jared Carlson-Stevermer
    11. Meghna Gupta
    12. Meng Yao Zhang
    13. Victor L. Lam
    14. Yang Li
    15. Zanlin Yu
    16. Erron W. Titus
    17. Amy Diallo
    18. Jennifer Oki
    19. Kevin Holden
    20. Nevan Krogan
    21. Danica Galonić Fujimori
    22. Melanie Ott

    Reviewed by ScreenIT

    1 evaluationAppears in 1 listLatest version Latest activity

  4. Profiling RT-LAMP tolerance of sequence variation for SARS-CoV-2 RNA detection

    1. Esta Tamanaha
    2. Yinhua Zhang
    3. Nathan A. Tanner

    Reviewed by ScreenIT

    1 evaluationAppears in 1 listLatest version Latest activity

  5. A panel of nanobodies recognizing conserved hidden clefts of all SARS-CoV-2 spike variants including Omicron

    1. Ryota Maeda
    2. Junso Fujita
    3. Yoshinobu Konishi
    4. Yasuhiro Kazuma
    5. Hiroyuki Yamazaki
    6. Itsuki Anzai
    7. Tokiko Watanabe
    8. Keishi Yamaguchi
    9. Kazuki Kasai
    10. Kayoko Nagata
    11. Yutaro Yamaoka
    12. Kei Miyakawa
    13. Akihide Ryo
    14. Kotaro Shirakawa
    15. Kei Sato
    16. Fumiaki Makino
    17. Yoshiharu Matsuura
    18. Tsuyoshi Inoue
    19. Akihiro Imura
    20. Keiichi Namba
    21. Akifumi Takaori-Kondo

    Reviewed by ScreenIT

    1 evaluationAppears in 1 listLatest version Latest activity

  6. Structure–function analysis of the nsp14 N7–guanine methyltransferase reveals an essential role in Betacoronavirus replication

    1. Natacha S. Ogando
    2. Priscila El Kazzi
    3. Jessika C. Zevenhoven-Dobbe
    4. Brenda W. Bontes
    5. Alice Decombe
    6. Clara C. Posthuma
    7. Volker Thiel
    8. Bruno Canard
    9. François Ferron
    10. Etienne Decroly
    11. Eric J. Snijder

    Reviewed by ScreenIT

    1 evaluationAppears in 1 listLatest version Latest activity

  7. Structural and functional characterization of NEMO cleavage by SARS-CoV-2 3CLpro

    1. Mikhail A. Hameedi
    2. Erica T. Prates
    3. Michael R. Garvin
    4. Irimpan I. Mathews
    5. B. Kirtley Amos
    6. Omar Demerdash
    7. Mark Bechthold
    8. Mamta Iyer
    9. Simin Rahighi
    10. Daniel W. Kneller
    11. Andrey Kovalevsky
    12. Stephan Irle
    13. Van-Quan Vuong
    14. Julie C. Mitchell
    15. Audrey Labbe
    16. Stephanie Galanie
    17. Soichi Wakatsuki
    18. Daniel Jacobson

    Reviewed by ScreenIT

    1 evaluationAppears in 1 listLatest version Latest activity

  8. SARS-CoV-2 RdRp uses NDPs as a substrate and is able to incorporate NHC into RNA from diphosphate form molnupiravir

    1. Maofeng Wang
    2. Cancan Wu
    3. Nan Liu
    4. Fengyu Zhang
    5. Hongjie Dong
    6. Shuai Wang
    7. Min Chen
    8. Xiaoqiong Jiang
    9. Kundi Zhang
    10. Lichuan Gu

    Reviewed by ScreenIT

    1 evaluationAppears in 1 listLatest version Latest activity

  9. Molecular signature of postmortem lung tissue from COVID-19 patients suggests distinct trajectories driving mortality

    1. Anshul Budhraja
    2. Anubhav Basu
    3. Atish Gheware
    4. Dasari Abhilash
    5. Seesandra Rajagopala
    6. Suman Pakala
    7. Madhuresh Sumit
    8. Animesh Ray
    9. Arulselvi Subramaniam
    10. Purva Mathur
    11. Aruna Nambirajan
    12. Sachin Kumar
    13. Ritu Gupta
    14. Naveet Wig
    15. Anjan Trikha
    16. Randeep Guleria
    17. Chitra Sarkar
    18. Ishaan Gupta
    19. Deepali Jain

    Reviewed by ScreenIT

    1 evaluationAppears in 1 listLatest version Latest activity

  10. SARS-CoV-2 infection in free-ranging white-tailed deer ( Odocoileus virginianus )

    1. Vanessa L. Hale
    2. Patricia M. Dennis
    3. Dillon S. McBride
    4. Jaqueline M. Nolting
    5. Christopher Madden
    6. Devra Huey
    7. Margot Ehrlich
    8. Jennifer Grieser
    9. Jenessa Winston
    10. Dusty Lombardi
    11. Stormy Gibson
    12. Linda Saif
    13. Mary L. Killian
    14. Kristina Lantz
    15. Rachel Tell
    16. Mia Torchetti
    17. Suelee Robbe-Austerman
    18. Martha I. Nelson
    19. Seth A. Faith
    20. Andrew S. Bowman

    Reviewed by ScreenIT, NCRC

    2 evaluationsAppears in 3 listsLatest version Latest activity
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