Immunology

A third vaccination with a single T cell epitope protects against SARS-CoV-2 infection in the absence of neutralizing antibodies

1. Iris N. Pardieck
2. Esmé T.I. van der Gracht
3. Dominique M.B. Veerkamp
4. Felix M. Behr
5. Suzanne van Duikeren
6. Guillaume Beyrend
7. Jasper Rip
8. Reza Nadafi
9. Tetje C. van der Sluis
10. Elham Beyranvand Nejad
11. Nils Mülling
12. Dena J. Brasem
13. Marcel G.M. Camps
14. Sebenzile K. Myeni
15. Peter J. Bredenbeek
16. Marjolein Kikkert
17. Yeonsu Kim
18. Luka Cicin-Sain
19. Tamim Abdelaal
20. Klaas P.J.M. van Gisbergen
21. Kees L.M.C. Franken
22. Jan Wouter Drijfhout
23. Cornelius J.M. Melief
24. Gerben C.M. Zondag
25. Ferry Ossendorp
26. Ramon Arens

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A recurring YYDRxG pattern in broadly neutralizing antibodies to a conserved site on SARS-CoV-2, variants of concern, and related viruses

1. Hejun Liu
2. Chengzi I. Kaku
3. Ge Song
4. Meng Yuan
5. Raiees Andrabi
6. Dennis R. Burton
7. Laura M. Walker
8. Ian A. Wilson

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Zinc finger protein Zfp335 controls early T-cell development and survival through β-selection-dependent and -independent mechanisms

1. Xin Wang
2. Anjun Jiao
3. Lina Sun
4. Wenhua Li
5. Biao Yang
6. Yanhong Su
7. Renyi Ding
8. Cangang Zhang
9. Haiyan Liu
10. Xiaofeng Yang
11. Chenming Sun
12. Baojun Zhang

• Curated by eLife

  Evaluation Summary:

  The authors have discovered that the transcription factor Zfp335 is an important regulator of early T cell development in the thymus. This paper will be of interest to scientists within the field of T cell development. The approaches used are thoughtful and rigorous and the key claims are supported by the data. Whether or not Zfp335 specifically controls beta-selection via the gene targets described requires additional experimentation.

  (This preprint has been reviewed by eLife. We include the public reviews from the reviewers here; the authors also receive private feedback with suggested changes to the manuscript. The reviewers remained anonymous to the authors.)

Reviewed by eLife

Distinguishing COVID-19 infection and vaccination history by T cell reactivity

1. Esther Dawen Yu
2. Eric Wang
3. Emily Garrigan
4. Benjamin Goodwin
5. Aaron Sutherland
6. James Chang
7. Rosa Isela Gálvez
8. Jose Mateus
9. Stephen A. Rawlings
10. Davey M. Smith
11. April Frazier
12. Daniela Weiskopf
13. Jennifer M. Dan
14. Shane Crotty
15. Alba Grifoni
16. Ricardo da Silva Antunes
17. Alessandro Sette

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Viral infection engenders bona fide and bystander lung memory B cell subsets through permissive selection

1. Claude Gregoire
2. Lionel Spinelli
3. Sergio Villazala-Merino
4. Laurine Gil
5. Myriam Moussa
6. Chuang Dong
7. Ana Zarubica
8. Mathieu Fallet
9. Jean-Marc Navarro
10. Bernard Malissen
11. Pierre Milpied
12. Mauro Gaya

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Considerable escape of SARS-CoV-2 Omicron to antibody neutralization

1. Delphine Planas
2. Nell Saunders
3. Piet Maes
4. Florence Guivel-Benhassine
5. Cyril Planchais
6. Julian Buchrieser
7. William-Henry Bolland
8. Françoise Porrot
9. Isabelle Staropoli
10. Frederic Lemoine
11. Hélène Péré
12. David Veyer
13. Julien Puech
14. Julien Rodary
15. Guy Baele
16. Simon Dellicour
17. Joren Raymenants
18. Sarah Gorissen
19. Caspar Geenen
20. Bert Vanmechelen
21. Tony Wawina-Bokalanga
22. Joan Martí-Carreras
23. Lize Cuypers
24. Aymeric Sève
25. Laurent Hocqueloux
26. Thierry Prazuck
27. Félix A. Rey
28. Etienne Simon-Loriere
29. Timothée Bruel
30. Hugo Mouquet
31. Emmanuel André
32. Olivier Schwartz

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Long-Read RNA Sequencing Identifies Polyadenylation Elongation and Differential Transcript Usage of Host Transcripts During SARS-CoV-2 In Vitro Infection

1. Jessie J.-Y. Chang
2. Josie Gleeson
3. Daniel Rawlinson
4. Ricardo De Paoli-Iseppi
5. Chenxi Zhou
6. Francesca L. Mordant
7. Sarah L. Londrigan
8. Michael B. Clark
9. Kanta Subbarao
10. Timothy P. Stinear
11. Lachlan J. M. Coin
12. Miranda E. Pitt

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Mucosal and systemic responses to SARS-CoV-2 vaccination in infection naïve and experienced individuals

1. Mohammad M. Sajadi
2. Amber Myers
3. James Logue
4. Saman Saadat
5. Narjes Shokatpour
6. James Quinn
7. Michelle Newman
8. Megan Deming
9. Zahra Rikhtegaran Tehrani
10. Maryam Karimi
11. Abdolrahim Abbasi
12. Mike Shlyak
13. Matthew B. Frieman
14. Shane Crotty
15. Anthony D. Harris

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Potential cross-protection against SARS-CoV-2 from previous exposure to bovine coronavirus

1. Lana Bazan Peters Querne
2. Fernanda Zettel Bastos
3. Breno Castello Branco Beirão

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High temporal resolution systems profiling reveals distinct patterns of interferon response after Covid-19 mRNA vaccination and SARS-CoV2 infection

1. Darawan Rinchai
2. Sara Deola
3. Gabriele Zoppoli
4. Basirudeen Syed Ahamed Kabeer
5. Sara Taleb
6. Igor Pavlovski
7. Selma Maacha
8. Giusy Gentilcore
9. Mohammed Toufiq
10. Lisa Mathew
11. Li Liu
12. Fazulur Rehaman Vempalli
13. Ghada Mubarak
14. Stephan Lorenz
15. Irene Sivieri
16. Gabriella Cirmena
17. Chiara Dentone
18. Paola Cuccarolo
19. Daniele Roberto Giacobbe
20. Federico Baldi
21. Alberto Garbarino
22. Benedetta Cigolini
23. Paolo Cremonesi
24. Michele Bedognetti
25. Alberto Ballestrero
26. Matteo Bassetti
27. Boris P. Hejblum
28. Tracy Augustine
29. Nicholas Van Panhuys
30. Rodolphe Thiebaut
31. Ricardo Branco
32. Tracey Chew
33. Maryam Shojaei
34. Kirsty Short
35. Carl Feng
36. PREDICT-19 consortium
37. Susu M. Zughaier
38. Andrea De Maria
39. Benjamin Tang
40. Ali Ait Hssain
41. Davide Bedognetti
42. Jean-Charles Grivel
43. Damien Chaussabel

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