Evaluated articles

CaBLAM: a high-contrast bioluminescent Ca2+ indicator derived from an engineered Oplophorus gracilirostris luciferase

1. Gerard G. Lambert
2. Emmanuel L. Crespo
3. Jeremy Murphy
4. Kevin L. Turner
5. Emily Gershowitz
6. Michaela Cunningham
7. Daniela Boassa
8. Selena Luong
9. Dmitrijs Celinskis
10. Justine J. Allen
11. Stephanie Venn
12. Yunlu Zhu
13. Mürsel Karadas
14. Jiakun Chen
15. Roberta Marisca
16. Hannah Gelnaw
17. Daniel K. Nguyen
18. Junru Hu
19. Brittany N. Sprecher
20. Maya O. Tree
21. Richard Orcutt
22. Daniel Heydari
23. Aidan B. Bell
24. Albertina Torreblanca-Zanca
25. Ali Hakimi
26. Tim Czopka
27. Shy Shoham
28. Katherine I. Nagel
29. David Schoppik
30. Arturo Andrade
31. Diane Lipscombe
32. Christopher I. Moore
33. Ute Hochgeschwender
34. Nathan C. Shaner

Reviewed by Arcadia Science

A secreted helminth microRNA suppresses gastrointestinal cell differentiation required for innate immunity

1. Matias G. Perez
2. Victoria Gillan
3. William M. Anderson
4. François Gerbe
5. Fabien Herbert
6. Tom N. McNeilly
7. Rick M. Maizels
8. Philippe Jay
9. Eileen Devaney
10. Collette Britton

Reviewed by Arcadia Science

Virtual staining from bright-field microscopy for label-free quantitative analysis of plant cell structures

1. Manami Ichita
2. Haruna Yamamichi
3. Takumi Higaki

Reviewed by Arcadia Science

Toward community-driven visual proteomics with large-scale cryo-electron tomography of Chlamydomonas reinhardtii

1. Ron Kelley
2. Sagar Khavnekar
3. Ricardo D. Righetto
4. Jessica Heebner
5. Martin Obr
6. Xianjun Zhang
7. Saikat Chakraborty
8. Grigory Tagiltsev
9. Alicia K. Michael
10. Sofie van Dorst
11. Florent Waltz
12. Caitlyn L. McCafferty
13. Lorenz Lamm
14. Simon Zufferey
15. Philippe Van der Stappen
16. Hugo van den Hoek
17. Wojciech Wietrzynski
18. Pavol Harar
19. William Wan
20. John A.G. Briggs
21. Jürgen M. Plitzko
22. Benjamin D. Engel
23. Abhay Kotecha

Reviewed by Arcadia Science

Mapping targetable sites on the human surfaceome for the design of novel binders

1. Petra E. M. Balbi
2. Ahmed Sadek
3. Anthony Marchand
4. Ta-Yi Yu
5. Jovan Damjanovic
6. Sandrine Georgeon
7. Joseph Schmidt
8. Simone Fulle
9. Che Yang
10. Hamed Khakzad
11. Bruno E. Correia

Reviewed by Arcadia Science

Viro3D: a comprehensive database of virus protein structure predictions

1. Ulad Litvin
2. Spyros Lytras
3. Alexander Jack
4. David L Robertson
5. Joseph Hughes
6. Joe Grove

Reviewed by Arcadia Science

Eliminating Aggressive Cancers via PROTAC-like Inducers of Ferroptosis

1. Avital Oknin-Vaisman
2. Deepanjan Panda
3. Rostislav Novak
4. Eliya Bitman-Lotan
5. Nikolett Pahor
6. Yamen Abu Ahmed
7. Guy Kamnesky
8. Markus E. Diefenbacher
9. Ashraf Brik
10. Amir Orian

Reviewed by Arcadia Science

Medium-sized protein language models perform well at transfer learning on realistic datasets

1. Luiz C. Vieira
2. Morgan L. Handojo
3. Claus O. Wilke

Reviewed by Arcadia Science

On the Variation of Structural Divergence Among Residues in Enzyme Evolution

1. Julian Echave
2. Mathilde Carpentier

Reviewed by Arcadia Science

Quantifying Data Distortion in Bar Graphs in Biological Research

1. Teng-Jui Lin
2. Markita P. Landry

Reviewed by Arcadia Science

Holotomographic microscopy reveals label-free quantitative dynamics of endothelial cells during endothelialization

1. William D. Leineweber
2. Gabriela Acevedo Munares
3. Christian Leycam
4. Raul Michael
5. Juliette Noyer
6. Patrick Jurney

Reviewed by Arcadia Science

Reviewed by Arcadia Science

Acetylation-Primed SUMOylation Drives RORβ Turnover via a p300-SIRT1 Regulatory Axis

1. Timothy R. O’Leary
2. Denis Shutin
3. Nadeska I. Montalvan
4. Nereida M. Abad-Yang
5. Vuong Dang
6. Dean P. Edwards
7. Patrick R. Griffin
8. Mi Ra Chang

Reviewed by Arcadia Science

Fluctuations and the limit of predictability in protein evolution

1. Saverio Rossi
2. Leonardo Di Bari
3. Martin Weigt
4. Francesco Zamponi

Reviewed by Arcadia Science

Identification of a Neuroimmune Circuit that Regulates Allergic Inflammation in the Esophagus

1. Kendall Kellerman
2. Mia Natale
3. Eddie Gerstner
4. Yrina Rochman
5. Mark Rochman
6. Michael P. Jankowski
7. Marc E. Rothenberg

Reviewed by Arcadia Science

Proximity labeling defines the phagosome lumen proteome of murine and primary human macrophages

1. Benjamin L. Allsup
2. Supriya Gharpure
3. Bryan D. Bryson

Reviewed by Arcadia Science

A CRISPRi Library Screen in Group B Streptococcus Identifies Surface Immunogenic Protein (Sip) as a Mediator of Multiple Host Interactions

1. K Firestone
2. KP Gopalakrishna
3. LM Rogers
4. A Peters
5. JA Gaddy
6. C Nichols
7. MH Hall
8. HN Varela
9. SM Carlin
10. GH Hillebrand
11. EJ Giacobe
12. DM Aronoff
13. TA Hooven

Reviewed by Arcadia Science

Genotypic and phenotypic consequences of domestication in dogs

1. Sweetalana
2. Shirin Nataneli
3. Shengmiao Huang
4. Jazlyn A Mooney
5. Zachary A Szpiech

Reviewed by Arcadia Science

Light-Dependent Ethanol Assimilation By Model Red Microaga Galdieria sulphuraria

1. Igor Stadnichuk
2. Yulia Bolychevtseva

Reviewed by Arcadia Science

Miniaturizing, Modifying, and Magnifying Nature’s Proteins with Raygun

1. Kapil Devkota
2. Daichi Shonai
3. Joey Mao
4. Young Su Ko
5. Wei Wang
6. Scott Soderling
7. Rohit Singh

Reviewed by Arcadia Science