GigaScience

Latest preprint reviews

1. Vulture: cloud-enabled scalable mining of microbial reads in public scRNA-seq data

   This article has 6 authors:

   1. Junyi Chen
   2. Danqing Yin
   3. Harris Y H Wong
   4. Xin Duan
   5. Ken H O Yu
   6. Joshua W K Ho

   Reviewed by GigaScience

2. A high-quality pseudo-phased genome for Melaleuca quinquenervia shows allelic diversity of NLR-type resistance genes

   This article has 9 authors:

   1. Stephanie H Chen
   2. Alyssa M Martino
   3. Zhenyan Luo
   4. Benjamin Schwessinger
   5. Ashley Jones
   6. Tamene Tolessa
   7. Jason G Bragg
   8. Peri A Tobias
   9. Richard J Edwards

   Reviewed by GigaScience

3. Variance Analysis of LC-MS Experimental Factors and Their Impact on Machine Learning

   This article has 7 authors:

   1. Tobias Greisager Rehfeldt
   2. Konrad Krawczyk
   3. Simon Gregersen Echers
   4. Paolo Marcatili
   5. Pawel Palczynski
   6. Richard Röttger
   7. Veit Schwämmle

   Reviewed by GigaScience

4. Finding the LMA needle in the wheat proteome haystack

   This article has 11 authors:

   1. Delphine Vincent
   2. AnhDuyen Bui
   3. Vilnis Ezernieks
   4. Saleh Shahinfar
   5. Timothy Luke
   6. Doris Ram
   7. Nicholas Rigas
   8. Joe Panozzo
   9. Simone Rochfort
   10. Hans Daetwyler
   11. Matthew Hayden

   Reviewed by GigaScience

5. When do longer reads matter? A benchmark of long read de novo assembly tools for eukaryotic genomes

   This article has 7 authors:

   1. Bianca-Maria Cosma
   2. Ramin Shirali Hossein Zade
   3. Erin Noel Jordan
   4. Paul van Lent
   5. Chengyao Peng
   6. Stephanie Pillay
   7. Thomas Abeel

   Reviewed by GigaScience

6. SpheroScan: A User-Friendly Deep Learning Tool for Spheroid Image Analysis

   This article has 10 authors:

   1. Akshay Akshay
   2. Mitali Katoch
   3. Masoud Abedi
   4. Mustafa Besic
   5. Navid Shekarchizadeh
   6. Fiona C. Burkhard
   7. Alex Bigger-Allen
   8. Rosalyn M. Adam
   9. Katia Monastyrskaya
   10. Ali Hashemi Gheinani

   Reviewed by GigaScience

7. cellsnake: a user-friendly tool for single-cell RNA sequencing analysis

   This article has 7 authors:

   1. Sinan U. Umu
   2. Karoline Rapp Vander-Elst
   3. Victoria T. Karlsen
   4. Manto Chouliara
   5. Espen Sønderaal Bækkevold
   6. Frode Lars Jahnsen
   7. Diana Domanska

   Reviewed by GigaScience

8. Developing best practices for genotyping-by-sequencing analysis in the construction of linkage maps

   This article has 12 authors:

   1. Cristiane Hayumi Taniguti
   2. Lucas Mitsuo Taniguti
   3. Rodrigo Rampazo Amadeu
   4. Jeekin Lau
   5. Gabriel de Siqueira Gesteira
   6. Thiago de Paula Oliveira
   7. Getulio Caixeta Ferreira
   8. Guilherme da Silva Pereira
   9. David Byrne
   10. Marcelo Mollinari
   11. Oscar Riera-Lizarazu
   12. Antonio Augusto Franco Garcia

   Reviewed by GigaScience

9. Computational prediction of human deep intronic variation

   This article has 4 authors:

   1. Pedro Barbosa
   2. Rosina Savisaar
   3. Maria Carmo-Fonseca
   4. Alcides Fonseca

   Reviewed by GigaScience

10. Single-cell transcriptome analysis illuminating the characteristics of species-specific innate immune responses against viral infections

    This article has 7 authors:

    1. Hirofumi Aso
    2. Jumpei Ito
    3. Haruka Ozaki
    4. Yukie Kashima
    5. Yutaka Suzuki
    6. Yoshio Koyanagi
    7. Kei Sato

    Reviewed by GigaScience