GigaScience

Latest preprint reviews

1. NCBI BLAST+ integrated into Galaxy

   This article has 5 authors:

   1. Peter J. A. Cock
   2. John M. Chilton
   3. Björn Grüning
   4. James E. Johnson
   5. Nicola Soranzo

   Reviewed by GigaScience

2. ISA API: An open platform for interoperable life science experimental metadata

   This article has 21 authors:

   1. David Johnson
   2. Dominique Batista
   3. Keeva Cochrane
   4. Robert P Davey
   5. Anthony Etuk
   6. Alejandra Gonzalez-Beltran
   7. Kenneth Haug
   8. Massimiliano Izzo
   9. Martin Larralde
   10. Thomas N Lawson
   11. Alice Minotto
   12. Pablo Moreno
   13. Venkata Chandrasekhar Nainala
   14. Claire O'Donovan
   15. Luca Pireddu
   16. Pierrick Roger
   17. Felix Shaw
   18. Christoph Steinbeck
   19. Ralf J M Weber
   20. Susanna-Assunta Sansone
   21. Philippe Rocca-Serra

   Reviewed by GigaScience

3. RNA-Seq analysis and annotation of a draft blueberry genome assembly identifies candidate genes involved in fruit ripening, biosynthesis of bioactive compounds, and stage-specific alternative splicing

   This article has 10 authors:

   1. Vikas Gupta
   2. April D Estrada
   3. Ivory Blakley
   4. Rob Reid
   5. Ketan Patel
   6. Mason D Meyer
   7. Stig Uggerhøj Andersen
   8. Allan F Brown
   9. Mary Ann Lila
   10. Ann E Loraine

   Reviewed by GigaScience

4. A reference bacterial genome dataset generated on the MinION™ portable single-molecule nanopore sequencer

   This article has 3 authors:

   1. Joshua Quick
   2. Aaron R Quinlan
   3. Nicholas J Loman

   Reviewed by GigaScience

5. A data repository and analysis framework for spontaneous neural activity recordings in developing retina

   This article has 6 authors:

   1. Stephen John Eglen
   2. Michael Weeks
   3. Mark Jessop
   4. Jennifer Simonotto
   5. Tom Jackson
   6. Evelyne Sernagor

   Reviewed by GigaScience

6. A high-quality genome and comparison of short- versus long-read transcriptome of the palaearctic duck Aythya fuligula (tufted duck)

   This article has 20 authors:

   1. Ralf C Mueller
   2. Patrik Ellström
   3. Kerstin Howe
   4. Marcela Uliano-Silva
   5. Richard I Kuo
   6. Katarzyna Miedzinska
   7. Amanda Warr
   8. Olivier Fedrigo
   9. Bettina Haase
   10. Jacquelyn Mountcastle
   11. William Chow
   12. James Torrance
   13. Jonathan M D Wood
   14. Josef D Järhult
   15. Mahmoud M Naguib
   16. Björn Olsen
   17. Erich D Jarvis
   18. Jacqueline Smith
   19. Lél Eöry
   20. Robert H S Kraus

   Reviewed by GigaScience

7. An overview of the National COVID-19 Chest Imaging Database: data quality and cohort analysis

   This article has 16 authors:

   1. Dominic Cushnan
   2. Oscar Bennett
   3. Rosalind Berka
   4. Ottavia Bertolli
   5. Ashwin Chopra
   6. Samie Dorgham
   7. Alberto Favaro
   8. Tara Ganepola
   9. Mark Halling-Brown
   10. Gergely Imreh
   11. Joseph Jacob
   12. Emily Jefferson
   13. François Lemarchand
   14. Daniel Schofield
   15. Jeremy C Wyatt
   16. NCCID Collaborative

   Reviewed by GigaScience, ScreenIT

8. Population modeling with machine learning can enhance measures of mental health

   This article has 6 authors:

   1. Kamalaker Dadi
   2. Gaël Varoquaux
   3. Josselin Houenou
   4. Danilo Bzdok
   5. Bertrand Thirion
   6. Denis Engemann

   Reviewed by GigaScience

9. Detection and characterization of low and high genome coverage regions using an efficient running median and a double threshold approach

   This article has 4 authors:

   1. Dimitri Desvillechabrol
   2. Christiane Bouchier
   3. Sean Kennedy
   4. Thomas Cokelaer

   Reviewed by GigaScience

10. Open Humans: A platform for participant-centered research and personal data exploration

    This article has 13 authors:

    1. Bastian Greshake Tzovaras
    2. Misha Angrist
    3. Kevin Arvai
    4. Mairi Dulaney
    5. Vero Estrada-Galiñanes
    6. Beau Gunderson
    7. Tim Head
    8. Dana Lewis
    9. Oded Nov
    10. Orit Shaer
    11. Athina Tzovara
    12. Jason Bobe
    13. Mad Price Ball

    Reviewed by GigaScience