GigaScience

Latest preprint reviews

1. YAMP: a containerized workflow enabling reproducibility in metagenomics research

   This article has 3 authors:

   1. Alessia Visconti
   2. Tiphaine C Martin
   3. Mario Falchi

   Reviewed by GigaScience

2. Arabidopsis phenotyping through geometric morphometrics

   This article has 2 authors:

   1. Carlos A Manacorda
   2. Sebastian Asurmendi

   Reviewed by GigaScience

3. Experimenting with reproducibility: a case study of robustness in bioinformatics

   This article has 3 authors:

   1. Yang-Min Kim
   2. Jean-Baptiste Poline
   3. Guillaume Dumas

   Reviewed by GigaScience

4. Necklace: combining reference and assembled transcriptomes for more comprehensive RNA-Seq analysis

   This article has 2 authors:

   1. Nadia M Davidson
   2. Alicia Oshlack

   Reviewed by GigaScience

5. Fast-SG: an alignment-free algorithm for hybrid assembly

   This article has 4 authors:

   1. Alex Di Genova
   2. Gonzalo A Ruz
   3. Marie-France Sagot
   4. Alejandro Maass

   Reviewed by GigaScience

6. Independent assessment and improvement of wheat genome sequence assemblies using Fosill jumping libraries

   This article has 6 authors:

   1. Fu-Hao Lu
   2. Neil McKenzie
   3. George Kettleborough
   4. Darren Heavens
   5. Matthew D Clark
   6. Michael W Bevan

   Reviewed by GigaScience

7. ASaiM: a Galaxy-based framework to analyze microbiota data

   This article has 7 authors:

   1. Bérénice Batut
   2. Kévin Gravouil
   3. Clémence Defois
   4. Saskia Hiltemann
   5. Jean-François Brugère
   6. Eric Peyretaillade
   7. Pierre Peyret

   Reviewed by GigaScience

8. Error correcting optical mapping data

   This article has 5 authors:

   1. Kingshuk Mukherjee
   2. Darshan Washimkar
   3. Martin D Muggli
   4. Leena Salmela
   5. Christina Boucher

   Reviewed by GigaScience

9. zUMIs - A fast and flexible pipeline to process RNA sequencing data with UMIs

   This article has 5 authors:

   1. Swati Parekh
   2. Christoph Ziegenhain
   3. Beate Vieth
   4. Wolfgang Enard
   5. Ines Hellmann

   Reviewed by GigaScience

10. SV-plaudit: A cloud-based framework for manually curating thousands of structural variants

    This article has 10 authors:

    1. Jonathan R Belyeu
    2. Thomas J Nicholas
    3. Brent S Pedersen
    4. Thomas A Sasani
    5. James M Havrilla
    6. Stephanie N Kravitz
    7. Megan E Conway
    8. Brian K Lohman
    9. Aaron R Quinlan
    10. Ryan M Layer

    Reviewed by GigaScience