GigaScience

Latest preprint reviews

1. PhenoMeNal: processing and analysis of metabolomics data in the cloud

   This article has 56 authors:

   1. Kristian Peters
   2. James Bradbury
   3. Sven Bergmann
   4. Marco Capuccini
   5. Marta Cascante
   6. Pedro de Atauri
   7. Timothy M D Ebbels
   8. Carles Foguet
   9. Robert Glen
   10. Alejandra Gonzalez-Beltran
   11. Ulrich L Günther
   12. Evangelos Handakas
   13. Thomas Hankemeier
   14. Kenneth Haug
   15. Stephanie Herman
   16. Petr Holub
   17. Massimiliano Izzo
   18. Daniel Jacob
   19. David Johnson
   20. Fabien Jourdan
   21. Namrata Kale
   22. Ibrahim Karaman
   23. Bita Khalili
   24. Payam Emami Khonsari
   25. Kim Kultima
   26. Samuel Lampa
   27. Anders Larsson
   28. Christian Ludwig
   29. Pablo Moreno
   30. Steffen Neumann
   31. Jon Ander Novella
   32. Claire O'Donovan
   33. Jake T M Pearce
   34. Alina Peluso
   35. Marco Enrico Piras
   36. Luca Pireddu
   37. Michelle A C Reed
   38. Philippe Rocca-Serra
   39. Pierrick Roger
   40. Antonio Rosato
   41. Rico Rueedi
   42. Christoph Ruttkies
   43. Noureddin Sadawi
   44. Reza M Salek
   45. Susanna-Assunta Sansone
   46. Vitaly Selivanov
   47. Ola Spjuth
   48. Daniel Schober
   49. Etienne A Thévenot
   50. Mattia Tomasoni
   51. Merlijn van Rijswijk
   52. Michael van Vliet
   53. Mark R Viant
   54. Ralf J M Weber
   55. Gianluigi Zanetti
   56. Christoph Steinbeck

   Reviewed by GigaScience

2. Lilikoi: an R package for personalized pathway-based classification modeling using metabolomics data

   This article has 5 authors:

   1. Fadhl M Al-Akwaa
   2. Breck Yunits
   3. Sijia Huang
   4. Hassam Alhajaji
   5. Lana X Garmire

   Reviewed by GigaScience

3. BLINK: a package for the next level of genome-wide association studies with both individuals and markers in the millions

   This article has 5 authors:

   1. Meng Huang
   2. Xiaolei Liu
   3. Yao Zhou
   4. Ryan M Summers
   5. Zhiwu Zhang

   Reviewed by GigaScience

4. Efficient and accurate detection of splice junctions from RNAseq with Portcullis

   This article has 4 authors:

   1. Daniel Mapleson
   2. Luca Venturini
   3. Gemy Kaithakottil
   4. David Swarbreck

   Reviewed by GigaScience

5. Re-assembly, quality evaluation, and annotation of 678 microbial eukaryotic reference transcriptomes

   This article has 3 authors:

   1. Lisa K Johnson
   2. Harriet Alexander
   3. C Titus Brown

   Reviewed by GigaScience

6. Ximmer: a system for improving accuracy and consistency of CNV calling from exome data

   This article has 4 authors:

   1. Simon P Sadedin
   2. Justine A Ellis
   3. Seth L Masters
   4. Alicia Oshlack

   Reviewed by GigaScience

7. Single-cell RNA-seq reveals dynamic transcriptome profiling in human early neural differentiation

   This article has 20 authors:

   1. Zhouchun Shang
   2. Dongsheng Chen
   3. Quanlei Wang
   4. Shengpeng Wang
   5. Qiuting Deng
   6. Liang Wu
   7. Chuanyu Liu
   8. Xiangning Ding
   9. Shiyou Wang
   10. Jixing Zhong
   11. Doudou Zhang
   12. Xiaodong Cai
   13. Shida Zhu
   14. Huanming Yang
   15. Longqi Liu
   16. J Lynn Fink
   17. Fang Chen
   18. Xiaoqing Liu
   19. Zhengliang Gao
   20. Xun Xu

   Reviewed by GigaScience

8. Monitoring changes in the Gene Ontology and their impact on genomic data analysis

   This article has 3 authors:

   1. Matthew Jacobson
   2. Adriana Estela Sedeño-Cortés
   3. Paul Pavlidis

   Reviewed by GigaScience

9. Imaging tissues and cells beyond the diffraction limit with structured illumination microscopy and Bayesian image reconstruction

   This article has 6 authors:

   1. Jakub Pospíšil
   2. Tomáš Lukeš
   3. Justin Bendesky
   4. Karel Fliegel
   5. Kathrin Spendier
   6. Guy M. Hagen

   Reviewed by GigaScience

10. PhenoSpD: an integrated toolkit for phenotypic correlation estimation and multiple testing correction using GWAS summary statistics

    This article has 8 authors:

    1. Jie Zheng
    2. Tom G. Richardson
    3. Louise A. C. Millard
    4. Gibran Hemani
    5. Christopher Raistrick
    6. Bjarni Vilhjalmsson
    7. Philip Haycock
    8. Tom R Gaunt

    Reviewed by GigaScience