GigaScience

Latest preprint reviews

1. ChronoRoot: High-throughput phenotyping by deep segmentation networks reveals novel temporal parameters of plant root system architecture

   This article has 11 authors:

   1. Nicolás Gaggion
   2. Federico Ariel
   3. Vladimir Daric
   4. Éric Lambert
   5. Simon Legendre
   6. Thomas Roulé
   7. Alejandra Camoirano
   8. Diego H Milone
   9. Martin Crespi
   10. Thomas Blein
   11. Enzo Ferrante

   Reviewed by GigaScience

2. Phylogenetic diversity analysis of shotgun metagenomic reads describes gut microbiome development and treatment effects in the post-weaned pig

   This article has 9 authors:

   1. Daniela Gaio
   2. Matthew Z. DeMaere
   3. Kay Anantanawat
   4. Graeme J Eamens
   5. Tiziana Zingali
   6. Linda Falconer
   7. Toni A. Chapman
   8. Steven Djordjevic
   9. Aaron E. Darling

   Reviewed by GigaScience

3. BiSulfite Bolt: A BiSulfite Sequencing Analysis Platform

   This article has 5 authors:

   1. Colin Farrell
   2. Michael Thompson
   3. Anela Tosevska
   4. Adewale Oyetunde
   5. Matteo Pellegrini

   Reviewed by GigaScience

4. The germline mutational process in rhesus macaque and its implications for phylogenetic dating

   This article has 11 authors:

   1. Lucie A. Bergeron
   2. Søren Besenbacher
   3. Jaco Bakker
   4. Jiao Zheng
   5. Panyi Li
   6. George Pacheco
   7. Mikkel-Holger S. Sinding
   8. Maria Kamilari
   9. M. Thomas P. Gilbert
   10. Mikkel H. Schierup
   11. Guojie Zhang

   Reviewed by GigaScience

5. Fluorescence Microscopy Datasets for Training Deep Neural Networks

   This article has 6 authors:

   1. Guy M. Hagen
   2. Justin Bendesky
   3. Rosa Machado
   4. Tram-Anh Nguyen
   5. Tanmay Kumar
   6. Jonathan Ventura

   Reviewed by GigaScience

6. Chromatin conformation capture (Hi-C) sequencing of patient-derived xenografts: analysis guidelines

   This article has 7 authors:

   1. Mikhail G Dozmorov
   2. Katarzyna M Tyc
   3. Nathan C Sheffield
   4. David C Boyd
   5. Amy L Olex
   6. Jason Reed
   7. J Chuck Harrell

   Reviewed by GigaScience

7. Synonymous variants that disrupt messenger RNA structure are significantly constrained in the human population

   This article has 8 authors:

   1. Jeffrey B S Gaither
   2. Grant E Lammi
   3. James L Li
   4. David M Gordon
   5. Harkness C Kuck
   6. Benjamin J Kelly
   7. James R Fitch
   8. Peter White

   Reviewed by GigaScience

8. A chromosome-level genome assembly for the Pacific oyster ( Crassostrea gigas )

   This article has 8 authors:

   1. Carolina Peñaloza
   2. Alejandro P. Gutierrez
   3. Lel Eory
   4. Shan Wang
   5. Ximing Guo
   6. Alan L. Archibald
   7. Tim P. Bean
   8. Ross D. Houston

   Reviewed by GigaScience

9. Rapid development of cloud-native intelligent data pipelines for scientific data streams using the HASTE Toolkit

   This article has 10 authors:

   1. Ben Blamey
   2. Salman Toor
   3. Martin Dahlö
   4. Håkan Wieslander
   5. Philip J Harrison
   6. Ida-Maria Sintorn
   7. Alan Sabirsh
   8. Carolina Wählby
   9. Ola Spjuth
   10. Andreas Hellander

   Reviewed by GigaScience

10. Chromosome-level genome assemblies of the malaria vectors Anopheles coluzzii and Anopheles arabiensis

    This article has 10 authors:

    1. Anton Zamyatin
    2. Pavel Avdeyev
    3. Jiangtao Liang
    4. Atashi Sharma
    5. Chujia Chen
    6. Varvara Lukyanchikova
    7. Nikita Alexeev
    8. Zhijian Tu
    9. Max A. Alekseyev
    10. Igor V. Sharakhov

    Reviewed by GigaScience