1. Draft genome assemblies using sequencing reads from Oxford Nanopore Technology and Illumina platforms for four species of North American Fundulus killifish

    This article has 7 authors:
    1. Lisa K Johnson
    2. Ruta Sahasrabudhe
    3. James Anthony Gill
    4. Jennifer L Roach
    5. Lutz Froenicke
    6. C Titus Brown
    7. Andrew Whitehead

    Reviewed by GigaScience

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  2. An improved pig reference genome sequence to enable pig genetics and genomics research

    This article has 40 authors:
    1. Amanda Warr
    2. Nabeel Affara
    3. Bronwen Aken
    4. Hamid Beiki
    5. Derek M Bickhart
    6. Konstantinos Billis
    7. William Chow
    8. Lel Eory
    9. Heather A Finlayson
    10. Paul Flicek
    11. Carlos G Girón
    12. Darren K Griffin
    13. Richard Hall
    14. Greg Hannum
    15. Thibaut Hourlier
    16. Kerstin Howe
    17. David A Hume
    18. Osagie Izuogu
    19. Kristi Kim
    20. Sergey Koren
    21. Haibou Liu
    22. Nancy Manchanda
    23. Fergal J Martin
    24. Dan J Nonneman
    25. Rebecca E O'Connor
    26. Adam M Phillippy
    27. Gary A Rohrer
    28. Benjamin D Rosen
    29. Laurie A Rund
    30. Carole A Sargent
    31. Lawrence B Schook
    32. Steven G Schroeder
    33. Ariel S Schwartz
    34. Ben M Skinner
    35. Richard Talbot
    36. Elizabeth Tseng
    37. Christopher K Tuggle
    38. Mick Watson
    39. Timothy P L Smith
    40. Alan L Archibald

    Reviewed by GigaScience

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  3. Iterative hard thresholding in genome-wide association studies: Generalized linear models, prior weights, and double sparsity

    This article has 8 authors:
    1. Benjamin B Chu
    2. Kevin L Keys
    3. Christopher A German
    4. Hua Zhou
    5. Jin J Zhou
    6. Eric M Sobel
    7. Janet S Sinsheimer
    8. Kenneth Lange

    Reviewed by GigaScience

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  4. High-quality chromosome-scale assembly of the walnut ( Juglans regia L.) reference genome

    This article has 16 authors:
    1. Annarita Marrano
    2. Monica Britton
    3. Paulo A Zaini
    4. Aleksey V Zimin
    5. Rachael E Workman
    6. Daniela Puiu
    7. Luca Bianco
    8. Erica Adele Di Pierro
    9. Brian J Allen
    10. Sandeep Chakraborty
    11. Michela Troggio
    12. Charles A Leslie
    13. Winston Timp
    14. Abhaya Dandekar
    15. Steven L Salzberg
    16. David B Neale

    Reviewed by GigaScience

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  5. Sequencing smart: De novo sequencing and assembly approaches for a non-model mammal

    This article has 10 authors:
    1. Graham J Etherington
    2. Darren Heavens
    3. David Baker
    4. Ashleigh Lister
    5. Rose McNelly
    6. Gonzalo Garcia
    7. Bernardo Clavijo
    8. Iain Macaulay
    9. Wilfried Haerty
    10. Federica Di Palma

    Reviewed by GigaScience

    This article has 1 evaluationAppears in 1 listLatest version Latest activity
  6. The gene-rich genome of the scallop Pecten maximus

    This article has 21 authors:
    1. Nathan J Kenny
    2. Shane A McCarthy
    3. Olga Dudchenko
    4. Katherine James
    5. Emma Betteridge
    6. Craig Corton
    7. Jale Dolucan
    8. Dan Mead
    9. Karen Oliver
    10. Arina D Omer
    11. Sarah Pelan
    12. Yan Ryan
    13. Ying Sims
    14. Jason Skelton
    15. Michelle Smith
    16. James Torrance
    17. David Weisz
    18. Anil Wipat
    19. Erez L Aiden
    20. Kerstin Howe
    21. Suzanne T Williams

    Reviewed by GigaScience

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  7. Evaluating the genome and resistome of extensively drug-resistant Klebsiella pneumoniae using native DNA and RNA Nanopore sequencing

    This article has 7 authors:
    1. Miranda E Pitt
    2. Son H Nguyen
    3. Tânia P S Duarte
    4. Haotian Teng
    5. Mark A T Blaskovich
    6. Matthew A Cooper
    7. Lachlan J M Coin

    Reviewed by GigaScience

    This article has 1 evaluationAppears in 1 listLatest version Latest activity
  8. Multifaceted Hi-C benchmarking: what makes a difference in chromosome-scale genome scaffolding?

    This article has 6 authors:
    1. Mitsutaka Kadota
    2. Osamu Nishimura
    3. Hisashi Miura
    4. Kaori Tanaka
    5. Ichiro Hiratani
    6. Shigehiro Kuraku

    Reviewed by GigaScience

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  9. The draft nuclear genome assembly of Eucalyptus pauciflora : a pipeline for comparing de novo assemblies

    This article has 7 authors:
    1. Weiwen Wang
    2. Ashutosh Das
    3. David Kainer
    4. Miriam Schalamun
    5. Alejandro Morales-Suarez
    6. Benjamin Schwessinger
    7. Robert Lanfear

    Reviewed by GigaScience

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  10. Trochodendron aralioides , the first chromosome-level draft genome in Trochodendrales and a valuable resource for basal eudicot research

    This article has 4 authors:
    1. Joeri S Strijk
    2. Damien D Hinsinger
    3. Fengping Zhang
    4. Kunfang Cao

    Reviewed by GigaScience

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