Genomics

  1. Beyond the transcript: chromatin implications in trans-splicing in Trypanosomatids

    1. Romina Trinidad Zambrano Siri
    2. Paula Beati
    3. Lucas Inchausti
    4. Pablo Smircich
    5. Guillermo Daniel Alonso
    6. Josefina Ocampo

    Reviewed by Review Commons

    4 evaluationsAppears in 1 listLatest version Latest activity

  2. Chromatin accessibility variation provides insights into missing regulation underlying immune-mediated diseases

    1. Raehoon Jeong
    2. Martha L Bulyk

    • Curated by eLife

      eLife Assessment

      This paper addresses a significant question regarding the low overlap between genetic discoveries for human complex diseases and those for gene expression by emphasizing the contribution of cell-type-specific chromatin accessibility QTLs. The analyses supporting the main claims are convincing, and the key conclusions are valuable and of interest to readers in the fields of human genetics and functional genomics.

    Reviewed by eLife

    7 evaluationsAppears in 1 listLatest version Latest activity

  3. PathoGFAIR: a collection of FAIR and adaptable (meta)genomics workflows for (foodborne) pathogens detection and tracking

    1. Engy Nasr
    2. Anna Henger
    3. Björn Grüning
    4. Paul Zierep
    5. Bérénice Batut

    Reviewed by GigaScience

    2 evaluationsAppears in 1 listLatest version Latest activity

  4. A high-quality reference genome for the Ural Owl ( Strix uralensis ) enables investigations of cell cultures as a genomic resource for endangered species

    1. Ioannis Chrysostomakis
    2. Annika Mozer
    3. Camilla Bruno Di-Nizo
    4. Dominik Fischer
    5. Nafiseh Sargheini
    6. Laura von der Mark
    7. Bruno Huettel
    8. Jonas J. Astrin
    9. Till Töpfer
    10. Astrid Böhne

    Reviewed by GigaScience

    2 evaluationsAppears in 1 listLatest version Latest activity

  5. First chromosome-level genome assembly of the colonial tunicate Botryllus schlosseri

    1. Olivier De Thier
    2. Mohammed M.Tawfeeq
    3. Roland Faure
    4. Marie Lebel
    5. Philippe Dru
    6. Simon Blanchoud
    7. Alexandre Alié
    8. Federico D. Brown
    9. Jean-François Flot
    10. Stefano Tiozzo

    Reviewed by GigaScience

    3 evaluationsAppears in 1 listLatest version Latest activity

  6. Haplotype-resolved reference genomes of the sea turtle clade unveil ultra-syntenic genomes with hotspots of divergence

    1. Larissa S. Arantes
    2. Tom Brown
    3. Diego De Panis
    4. Scott D. Whiting
    5. Erin L. LaCasella
    6. Gabriella A. Carvajal
    7. Adam Kennedy
    8. Deana Edmunds
    9. Blair P. Bentley
    10. Jennifer Balacco
    11. Conor Whelan
    12. Nivesh Jain
    13. Tatiana Tilley
    14. Brian O’Toole
    15. Patrick Traore
    16. Erich D. Jarvis
    17. Oliver Berry
    18. Peter H. Dutton
    19. Lisa M. Komoroske
    20. Camila J. Mazzoni

    Reviewed by GigaScience

    3 evaluationsAppears in 1 listLatest version Latest activity

  7. CNSistent integration and feature extraction from somatic copy number profiles

    1. Adam Streck
    2. Roland F. Schwarz

    Reviewed by GigaScience

    3 evaluationsAppears in 1 listLatest version Latest activity

  8. The Open Pediatric Cancer Project

    1. Zhuangzhuang Geng
    2. Eric Wafula
    3. Ryan J Corbett
    4. Yuanchao Zhang
    5. Run Jin
    6. Krutika S Gaonkar
    7. Sangeeta Shukla
    8. Komal S Rathi
    9. Dave Hill
    10. Aditya Lahiri
    11. Daniel P Miller
    12. Alex Sickler
    13. Kelsey Keith
    14. Christopher Blackden
    15. Antonia Chroni
    16. Miguel A Brown
    17. Adam A Kraya
    18. Kaylyn L Clark
    19. Brian R Rood
    20. Adam C Resnick
    21. Nicholas Van Kuren
    22. John M Maris
    23. Alvin Farrel
    24. Mateusz P Koptyra
    25. Gerri R Trooskin
    26. Noel Coleman
    27. Yuankun Zhu
    28. Stephanie Stefankiewicz
    29. Zied Abdullaev
    30. Asif T Chinwalla
    31. Mariarita Santi
    32. Ammar S Naqvi
    33. Jennifer L Mason
    34. Carl J Koschmann
    35. Xiaoyan Huang
    36. Sharon J Diskin
    37. Kenneth Aldape
    38. Bailey K Farrow
    39. Weiping Ma
    40. Bo Zhang
    41. Brian M Ennis
    42. Sarah Tasian
    43. Saksham Phul
    44. Matthew R Lueder
    45. Chuwei Zhong
    46. Joseph M Dybas
    47. Pei Wang
    48. Deanne Taylor
    49. Jo Lynne Rokita

    Reviewed by GigaScience

    2 evaluationsAppears in 1 listLatest version Latest activity

  9. A comprehensive water buffalo pangenome reveals extensive structural variation linked to population specific signatures of selection

    1. Fazeela Arshad
    2. Siddharth Jayaraman
    3. Andrea Talenti
    4. Rachel Owen
    5. Muhammad Mohsin
    6. Shahid Mansoor
    7. Muhammad Asif
    8. James Prendergast

    Reviewed by GigaScience

    4 evaluationsAppears in 1 listLatest version Latest activity

  10. Breaking Through Biology's Data Wall: Expanding the Known Tree of Life by Over 10x using a Global Biodiscovery Pipeline

    1. Oliver Vince
    2. Phoebe Oldach
    3. Valerio Pereno
    4. Marcus H Y Leung
    5. Carla Greco
    6. Gus Minto-Cowcher
    7. Saif Ur-Rehman
    8. Keith Y K Kam
    9. William Chow
    10. Emma Bolton
    11. Bupe R Mwambingu
    12. Nadine L Greenhalgh
    13. Ineke E Knot
    14. Leif Christoffersen
    15. Marlon Clark
    16. Robert Pecoraro
    17. Aaron W Kollasch
    18. Tanggis Bohnuud
    19. Matthew Bakalar
    20. Philipp Lorenz
    21. Glen Gowers

    Reviewed by Arcadia Science

    1 evaluationAppears in 1 listLatest version Latest activity
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