Bioinformatics

  1. Chiron: translating nanopore raw signal directly into nucleotide sequence using deep learning

    1. Haotian Teng
    2. Minh Duc Cao
    3. Michael B Hall
    4. Tania Duarte
    5. Sheng Wang
    6. Lachlan J M Coin

    Reviewed by GigaScience

    1 evaluationAppears in 1 listLatest version Latest activity

  2. Quantitative super-resolution single molecule microscopy dataset of YFP-tagged growth factor receptors

    1. Tomáš Lukeš
    2. Jakub Pospíšil
    3. Karel Fliegel
    4. Theo Lasser
    5. Guy M Hagen

    Reviewed by GigaScience

    1 evaluationAppears in 1 listLatest version Latest activity

  3. Construction of the third-generation Zea mays haplotype map

    1. Robert Bukowski
    2. Xiaosen Guo
    3. Yanli Lu
    4. Cheng Zou
    5. Bing He
    6. Zhengqin Rong
    7. Bo Wang
    8. Dawen Xu
    9. Bicheng Yang
    10. Chuanxiao Xie
    11. Longjiang Fan
    12. Shibin Gao
    13. Xun Xu
    14. Gengyun Zhang
    15. Yingrui Li
    16. Yinping Jiao
    17. John F Doebley
    18. Jeffrey Ross-Ibarra
    19. Anne Lorant
    20. Vince Buffalo
    21. M Cinta Romay
    22. Edward S Buckler
    23. Doreen Ware
    24. Jinsheng Lai
    25. Qi Sun
    26. Yunbi Xu

    Reviewed by GigaScience

    1 evaluationAppears in 1 listLatest version Latest activity

  4. MEBS, a software platform to evaluate large (meta)genomic collections according to their metabolic machinery: unraveling the sulfur cycle

    1. Valerie De Anda
    2. Icoquih Zapata-Peñasco
    3. Augusto Cesar Poot-Hernandez
    4. Luis E Eguiarte
    5. Bruno Contreras-Moreira
    6. Valeria Souza

    Reviewed by GigaScience

    1 evaluationAppears in 1 listLatest version Latest activity

  5. Deep machine learning provides state-of-the-art performance in image-based plant phenotyping

    1. Michael P. Pound
    2. Jonathan A. Atkinson
    3. Alexandra J. Townsend
    4. Michael H. Wilson
    5. Marcus Griffiths
    6. Aaron S. Jackson
    7. Adrian Bulat
    8. Georgios Tzimiropoulos
    9. Darren M. Wells
    10. Erik H. Murchie
    11. Tony P. Pridmore
    12. Andrew P. French

    Reviewed by GigaScience

    1 evaluationAppears in 1 listLatest version Latest activity

  6. iCAVE: an open source tool for visualizing biomolecular networks in 3D, stereoscopic 3D and immersive 3D

    1. Vaja Liluashvili
    2. Selim Kalayci
    3. Eugene Fluder
    4. Manda Wilson
    5. Aaron Gabow
    6. Zeynep H. Gümüş

    Reviewed by GigaScience

    1 evaluationAppears in 1 listLatest version Latest activity

  7. A recurrence-based approach for validating structural variation using long-read sequencing technology

    1. Xuefang Zhao
    2. Alexandra M. Weber
    3. Ryan E. Mills

    Reviewed by GigaScience

    1 evaluationAppears in 1 listLatest version Latest activity

  8. 16GT: a fast and sensitive variant caller using a 16-genotype probabilistic model

    1. Ruibang Luo
    2. Michael C. Schatz
    3. Steven L. Salzberg

    Reviewed by GigaScience

    1 evaluationAppears in 1 listLatest version Latest activity

  9. Kronos: a workflow assembler for genome analytics and informatics

    1. M. Jafar Taghiyar
    2. Jamie Rosner
    3. Diljot Grewal
    4. Bruno M. Grande
    5. Radhouane Aniba
    6. Jasleen Grewal
    7. Paul C. Boutros
    8. Ryan D. Morin
    9. Ali Bashashati
    10. Sohrab P. Shah

    Reviewed by GigaScience

    1 evaluationAppears in 1 listLatest version Latest activity

  10. Bio-Docklets: virtualization containers for single-step execution of NGS pipelines

    1. Baekdoo Kim
    2. Thahmina Ali
    3. Carlos Lijeron
    4. Enis Afgan
    5. Konstantinos Krampis

    Reviewed by GigaScience

    1 evaluationAppears in 1 listLatest version Latest activity
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