Bioinformatics

  1. de novo assembly and population genomic survey of natural yeast isolates with the Oxford Nanopore MinION sequencer

    1. Benjamin Istace
    2. Anne Friedrich
    3. Léo d’Agata
    4. Sébastien Faye
    5. Emilie Payen
    6. Odette Beluche
    7. Claudia Caradec
    8. Sabrina Davidas
    9. Corinne Cruaud
    10. Gianni Liti
    11. Arnaud Lemainque
    12. Stefan Engelen
    13. Stefan Engelen
    14. Patrick Wincker
    15. Joseph Schacherer
    16. Jean-Marc Aury

    Reviewed by GigaScience

    1 evaluationAppears in 1 listLatest version Latest activity

  2. Clusterflock: A Flocking Algorithm for Isolating Congruent Phylogenomic Datasets

    1. Apurva Narechania
    2. Richard Baker
    3. Rob DeSalle
    4. Barun Mathema
    5. Sergios-Orestis Kolokotronis
    6. Barry Kreiswirth
    7. Paul J. Planet

    Reviewed by GigaScience

    1 evaluationAppears in 1 listLatest version Latest activity

  3. Streaming algorithms for identification of pathogens and antibiotic resistance potential from real-time MinION TM sequencing

    1. Minh Duc Cao
    2. Devika Ganesamoorthy
    3. Alysha G. Elliott
    4. Huihui Zhang
    5. Matthew A. Cooper
    6. Lachlan Coin

    Reviewed by GigaScience

    1 evaluationAppears in 1 listLatest version Latest activity

  4. Quantitative monitoring of nucleotide sequence data from genetic resources in context of their citation in the scientific literature

    1. Matthias Lange
    2. Blaise T F Alako
    3. Guy Cochrane
    4. Mehmood Ghaffar
    5. Martin Mascher
    6. Pia-Katharina Habekost
    7. Upneet Hillebrand
    8. Uwe Scholz
    9. Florian Schorch
    10. Jens Freitag
    11. Amber Hartman Scholz

    Reviewed by GigaScience

    4 evaluationsAppears in 1 listLatest version Latest activity

  5. AGOUTI: improving genome assembly and annotation using transcriptome data

    1. Simo V. Zhang
    2. Luting Zhuo
    3. Matthew W. Hahn

    Reviewed by GigaScience

    1 evaluationAppears in 1 listLatest version Latest activity

  6. Tools and techniques for computational reproducibility

    1. Stephen R. Piccolo
    2. Michael B. Frampton

    Reviewed by GigaScience

    1 evaluationAppears in 1 listLatest version Latest activity

  7. NCBI BLAST + integrated into Galaxy

    1. Peter J. A. Cock
    2. John M. Chilton
    3. Björn Grüning
    4. James E. Johnson
    5. Nicola Soranzo

    Reviewed by GigaScience

    4 evaluationsAppears in 1 listLatest version Latest activity

  8. ISA API: An open platform for interoperable life science experimental metadata

    1. David Johnson
    2. Keeva Cochrane
    3. Robert P. Davey
    4. Anthony Etuk
    5. Alejandra Gonzalez-Beltran
    6. Kenneth Haug
    7. Massimiliano Izzo
    8. Martin Larralde
    9. Thomas N. Lawson
    10. Alice Minotto
    11. Pablo Moreno
    12. Venkata Chandrasekhar Nainala
    13. Claire O’Donovan
    14. Luca Pireddu
    15. Pierrick Roger
    16. Felix Shaw
    17. Christoph Steinbeck
    18. Ralf J. M. Weber
    19. Susanna-Assunta Sansone
    20. Philippe Rocca-Serra

    Reviewed by GigaScience

    1 evaluationAppears in 1 listLatest version Latest activity

  9. Detection and characterization of low and high genome coverage regions using an efficient running median and a double threshold approach

    1. Dimitri Desvillechabrol
    2. Christiane Bouchier
    3. Sean Kennedy
    4. Thomas Cokelaer

    Reviewed by GigaScience

    1 evaluationAppears in 1 listLatest version Latest activity

  10. Open Humans: A platform for participant-centered research and personal data exploration

    1. Bastian Greshake Tzovaras
    2. Misha Angrist
    3. Kevin Arvai
    4. Mairi Dulaney
    5. Vero Estrada-Galiñanes
    6. Beau Gunderson
    7. Tim Head
    8. Dana Lewis
    9. Oded Nov
    10. Orit Shaer
    11. Athina Tzovara
    12. Jason Bobe
    13. Mad Price Ball

    Reviewed by GigaScience

    2 evaluationsAppears in 1 listLatest version Latest activity
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