Bioinformatics
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PhenoMeNal: processing and analysis of metabolomics data in the cloud
This article has 56 authors:Reviewed by GigaScience
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Lilikoi: an R package for personalized pathway-based classification modeling using metabolomics data
This article has 5 authors:Reviewed by GigaScience
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Efficient and accurate detection of splice junctions from RNAseq with Portcullis
This article has 4 authors:Reviewed by GigaScience
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Re-assembly, quality evaluation, and annotation of 678 microbial eukaryotic reference transcriptomes
This article has 3 authors:Reviewed by GigaScience
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Ximmer: a system for improving accuracy and consistency of CNV calling from exome data
This article has 4 authors:Reviewed by GigaScience
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Monitoring changes in the Gene Ontology and their impact on genomic data analysis
This article has 3 authors:Reviewed by GigaScience
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PhenoSpD: an integrated toolkit for phenotypic correlation estimation and multiple testing correction using GWAS summary statistics
This article has 11 authors:Reviewed by GigaScience
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ANNOgesic: a Swiss army knife for the RNA-seq based annotation of bacterial/archaeal genomes
This article has 3 authors:Reviewed by GigaScience
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Clinker: visualizing fusion genes detected in RNA-seq data
This article has 7 authors:Reviewed by GigaScience
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SVEngine: an efficient and versatile simulator of genome structural variations with features of cancer clonal evolution
This article has 7 authors:Reviewed by GigaScience