1. Monitoring changes in the Gene Ontology and their impact on genomic data analysis

    This article has 3 authors:
    1. Matthew Jacobson
    2. Adriana Estela Sedeño-Cortés
    3. Paul Pavlidis

    Reviewed by GigaScience

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  2. PhenoSpD: an integrated toolkit for phenotypic correlation estimation and multiple testing correction using GWAS summary statistics

    This article has 8 authors:
    1. Jie Zheng
    2. Tom G. Richardson
    3. Louise A. C. Millard
    4. Gibran Hemani
    5. Christopher Raistrick
    6. Bjarni Vilhjalmsson
    7. Philip Haycock
    8. Tom R Gaunt

    Reviewed by GigaScience

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  3. ANNOgesic: A Swiss army knife for the RNA-Seq based annotation of bacterial/archaeal genomes

    This article has 3 authors:
    1. Sung-Huan Yu
    2. Jörg Vogel
    3. Konrad U. Förstner

    Reviewed by GigaScience

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  4. Clinker: visualizing fusion genes detected in RNA-seq data

    This article has 7 authors:
    1. Breon M Schmidt
    2. Nadia M Davidson
    3. Anthony D K Hawkins
    4. Ray Bartolo
    5. Ian J Majewski
    6. Paul G Ekert
    7. Alicia Oshlack

    Reviewed by GigaScience

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  5. SVEngine: an efficient and versatile simulator of genome structural variations with features of cancer clonal evolution

    This article has 7 authors:
    1. Li Charlie Xia
    2. Dongmei Ai
    3. Hojoon Lee
    4. Noemi Andor
    5. Chao Li
    6. Nancy R Zhang
    7. Hanlee P Ji

    Reviewed by GigaScience

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  6. Clustering trees: a visualization for evaluating clusterings at multiple resolutions

    This article has 2 authors:
    1. Luke Zappia
    2. Alicia Oshlack

    Reviewed by GigaScience

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  7. Leveraging multiple transcriptome assembly methods for improved gene structure annotation

    This article has 5 authors:
    1. Luca Venturini
    2. Shabhonam Caim
    3. Gemy George Kaithakottil
    4. Daniel Lee Mapleson
    5. David Swarbreck

    Reviewed by GigaScience

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  8. Hot-starting software containers for STAR aligner

    This article has 4 authors:
    1. Pai Zhang
    2. Ling-Hong Hung
    3. Wes Lloyd
    4. Ka Yee Yeung

    Reviewed by GigaScience

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  9. AMBER: Assessment of Metagenome BinnERs

    This article has 7 authors:
    1. Fernando Meyer
    2. Peter Hofmann
    3. Peter Belmann
    4. Ruben Garrido-Oter
    5. Adrian Fritz
    6. Alexander Sczyrba
    7. Alice C McHardy

    Reviewed by GigaScience

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  10. MetaMap: an atlas of metatranscriptomic reads in human disease-related RNA-seq data

    This article has 9 authors:
    1. L M Simon
    2. S Karg
    3. A J Westermann
    4. M Engel
    5. A H A Elbehery
    6. B Hense
    7. M Heinig
    8. L Deng
    9. F J Theis

    Reviewed by GigaScience

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