1. TooManyCellsInteractive: A visualization tool for dynamic exploration of single-cell data

    This article has 4 authors:
    1. Conor Klamann
    2. Christie J Lau
    3. Javier Ruiz-Ramírez
    4. Gregory W Schwartz

    Reviewed by GigaScience

    This article has 3 evaluationsAppears in 1 listLatest version Latest activity
  2. Phyloformer: Fast, Accurate, and Versatile Phylogenetic Reconstruction with Deep Neural Networks

    This article has 5 authors:
    1. Luca Nesterenko
    2. Luc Blassel
    3. Philippe Veber
    4. Bastien Boussau
    5. Laurent Jacob

    Reviewed by Arcadia Science

    This article has 5 evaluationsAppears in 1 listLatest version Latest activity
  3. MOBFinder: a tool for MOB typing for plasmid metagenomic fragments based on language model

    This article has 4 authors:
    1. Tao Feng
    2. Shufang Wu
    3. Hongwei Zhou
    4. Zhencheng Fang

    Reviewed by GigaScience

    This article has 2 evaluationsAppears in 1 listLatest version Latest activity
  4. Deciphering cancer genomes with GenomeSpy: a grammar-based visualization toolkit

    This article has 13 authors:
    1. Kari Lavikka
    2. Jaana Oikkonen
    3. Yilin Li
    4. Taru Muranen
    5. Giulia Micoli
    6. Giovanni Marchi
    7. Alexandra Lahtinen
    8. Kaisa Huhtinen
    9. Rainer Lehtonen
    10. Sakari Hietanen
    11. Johanna Hynninen
    12. Anni Virtanen
    13. Sampsa Hautaniemi

    Reviewed by GigaScience

    This article has 3 evaluationsAppears in 1 listLatest version Latest activity
  5. Impact of reference design on estimating SARS-CoV-2 lineage abundances from wastewater sequencing data

    This article has 6 authors:
    1. Eva Aßmann
    2. Shelesh Agrawal
    3. Laura Orschler
    4. Sindy Böttcher
    5. Susanne Lackner
    6. Martin Hölzer

    Reviewed by GigaScience

    This article has 2 evaluationsAppears in 1 listLatest version Latest activity
  6. Peptipedia v2.0: A peptide sequence database and user-friendly web platform. A major update

    This article has 13 authors:
    1. Gabriel Cabas-Mora
    2. Anamaría Daza
    3. Nicole Soto-García
    4. Valentina Garrido
    5. Diego Alvarez
    6. Marcelo Navarrete
    7. Lindybeth Sarmiento-Varón
    8. Julieta H. Sepúlveda Yañez
    9. Mehdi D. Davari
    10. Frederic Cadet
    11. Álvaro Olivera-Nappa
    12. Roberto Uribe-Paredes
    13. David Medina-Ortiz

    Reviewed by Arcadia Science

    This article has 9 evaluationsAppears in 1 listLatest version Latest activity
  7. Multiple protein structure alignment at scale with FoldMason

    This article has 3 authors:
    1. Cameron L. M. Gilchrist
    2. Milot Mirdita
    3. Martin Steinegger

    Reviewed by Arcadia Science

    This article has 2 evaluationsAppears in 1 listLatest version Latest activity
  8. Genomic localization bias of secondary metabolite gene clusters and association with histone modifications in Aspergillus

    This article has 4 authors:
    1. Xin Zhang
    2. Iseult Leahy
    3. Jérȏme Collemare
    4. Michael F. Seidl

    Reviewed by Arcadia Science

    This article has 1 evaluationAppears in 1 listLatest version Latest activity
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