Evaluated articles

Virtual staining from bright-field microscopy for label-free quantitative analysis of plant cell structures

1. Manami Ichita
2. Haruna Yamamichi
3. Takumi Higaki

Reviewed by Arcadia Science

Towards community-driven visual proteomics with large-scale cryo-electron tomography of Chlamydomonas reinhardtii

1. Ron Kelley
2. Sagar Khavnekar
3. Ricardo D. Righetto
4. Jessica Heebner
5. Martin Obr
6. Xianjun Zhang
7. Saikat Chakraborty
8. Grigory Tagiltsev
9. Alicia K. Michael
10. Sofie van Dorst
11. Florent Waltz
12. Caitlyn L. McCafferty
13. Lorenz Lamm
14. Simon Zufferey
15. Philippe Van der Stappen
16. Hugo van den Hoek
17. Wojciech Wietrzynski
18. Pavol Harar
19. William Wan
20. John A.G. Briggs
21. Jürgen M. Plitzko
22. Benjamin D. Engel
23. Abhay Kotecha

Reviewed by Arcadia Science

Mapping targetable sites on the human surfaceome for the design of novel binders

1. Petra E. M. Balbi
2. Ahmed Sadek
3. Anthony Marchand
4. Ta-Yi Yu
5. Jovan Damjanovic
6. Sandrine Georgeon
7. Joseph Schmidt
8. Simone Fulle
9. Che Yang
10. Hamed Khakzad
11. Bruno E. Correia

Reviewed by Arcadia Science

Viro3D: a comprehensive database of virus protein structure predictions

1. Ulad Litvin
2. Spyros Lytras
3. Alexander Jack
4. David L Robertson
5. Joseph Hughes
6. Joe Grove

Reviewed by Arcadia Science

Eliminating Aggressive Cancers via PROTAC-like Inducers of Ferroptosis

1. Avital Oknin-Vaisman
2. Deepanjan Panda
3. Rostislav Novak
4. Eliya Bitman-Lotan
5. Nikolett Pahor
6. Yamen Abu Ahmed
7. Guy Kamnesky
8. Markus E. Diefenbacher
9. Ashraf Brik
10. Amir Orian

Reviewed by Arcadia Science

Medium-sized protein language models perform well at transfer learning on realistic datasets

1. Luiz C. Vieira
2. Morgan L. Handojo
3. Claus O. Wilke

Reviewed by Arcadia Science

On the variation of structural divergence among residues in enzyme evolution

1. Julian Echave
2. Mathilde Carpentier

Reviewed by Arcadia Science

Quantifying Data Distortion in Bar Graphs in Biological Research

1. Teng-Jui Lin
2. Markita P. Landry

Reviewed by Arcadia Science

Holotomographic microscopy reveals label-free quantitative dynamics of endothelial cells during endothelialization

1. William D. Leineweber
2. Gabriela Acevedo Munares
3. Christian Leycam
4. Raul Michael
5. Juliette Noyer
6. Patrick Jurney

Reviewed by Arcadia Science

Reviewed by Arcadia Science

Acetylation of RORβ by histone acetyltransferase p300 and deacetylation by SIRT1 modulates receptor stability, turnover and transcriptional activity

1. Timothy O’Leary
2. Denis Shutin
3. Dean P. Edwards
4. Patrick R. Griffin
5. Mi Ra Chang

Reviewed by Arcadia Science

Fluctuations and the limit of predictability in protein evolution

1. Saverio Rossi
2. Leonardo Di Bari
3. Martin Weigt
4. Francesco Zamponi

Reviewed by Arcadia Science

Identification of a Neuroimmune Circuit that Regulates Allergic Inflammation in the Esophagus

1. Kendall Kellerman
2. Mia Natale
3. Eddie Gerstner
4. Yrina Rochman
5. Mark Rochman
6. Michael P. Jankowski
7. Marc E. Rothenberg

Reviewed by Arcadia Science

Proximity labeling defines the phagosome lumen proteome of murine and primary human macrophages

1. Benjamin L. Allsup
2. Supriya Gharpure
3. Bryan D. Bryson

Reviewed by Arcadia Science

A CRISPRi Library Screen in Group B Streptococcus Identifies Surface Immunogenic Protein (Sip) as a Mediator of Multiple Host Interactions

1. K Firestone
2. KP Gopalakrishna
3. LM Rogers
4. A Peters
5. JA Gaddy
6. C Nichols
7. MH Hall
8. HN Varela
9. SM Carlin
10. GH Hillebrand
11. EJ Giacobe
12. DM Aronoff
13. TA Hooven

Reviewed by Arcadia Science

Genotypic and phenotypic consequences of domestication in dogs

1. Sweetalana
2. Shirin Nataneli
3. Shengmiao Huang
4. Jazlyn A Mooney
5. Zachary A Szpiech

Reviewed by Arcadia Science

Light-Dependent Ethanol Assimilation By Model Red Microaga Galdieria sulphuraria

1. Igor Stadnichuk
2. Yulia Bolychevtseva

Reviewed by Arcadia Science

Miniaturizing, Modifying, and Magnifying Nature’s Proteins with Raygun

1. Kapil Devkota
2. Daichi Shonai
3. Joey Mao
4. Young Su Ko
5. Wei Wang
6. Scott Soderling
7. Rohit Singh

Reviewed by Arcadia Science

Birth of new protein folds and functions in the virome

1. Jason Nomburg
2. Nathan Price
3. Jennifer A. Doudna

Reviewed by Arcadia Science

HyperMPNN – A general strategy to design thermostable proteins learned from hyperthermophiles

1. Moritz Ertelt
2. Phillip Schlegel
3. Max Beining
4. Leonard Kaysser
5. Jens Meiler
6. Clara T. Schoeder

Reviewed by Arcadia Science