Evaluated articles

Showing page 21 of 22 pages of list content

Analyzing climate variations on multiple timescales can guide Zika virus response measures

This article has 4 authors:
1. Á.G. Muñoz
2. M. C. Thomson
3. L. Goddard
4. S. Aldighieri
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version Jun 19, 2016Latest activity Jan 3, 2022
Streaming algorithms for identification of pathogens and antibiotic resistance potential from real-time MinION ^TM sequencing

This article has 6 authors:
1. Minh Duc Cao
2. Devika Ganesamoorthy
3. Alysha G. Elliott
4. Huihui Zhang
5. Matthew A. Cooper
6. Lachlan Coin
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version May 15, 2015Latest activity Jan 3, 2022
Quantitative monitoring of nucleotide sequence data from genetic resources in context of their citation in the scientific literature

This article has 11 authors:
1. Matthias Lange
2. Blaise T F Alako
3. Guy Cochrane
4. Mehmood Ghaffar
5. Martin Mascher
6. Pia-Katharina Habekost
7. Upneet Hillebrand
8. Uwe Scholz
9. Florian Schorch
10. Jens Freitag
11. Amber Hartman Scholz
Reviewed by GigaScience

This article has 4 evaluationsAppears in 1 listLatest version Dec 1, 2021Latest activity Jan 3, 2022
AGOUTI: improving genome assembly and annotation using transcriptome data

This article has 3 authors:
1. Simo V. Zhang
2. Luting Zhuo
3. Matthew W. Hahn
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version Nov 26, 2015Latest activity Jan 3, 2022
Tools and techniques for computational reproducibility

This article has 2 authors:
1. Stephen R. Piccolo
2. Michael B. Frampton
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version Jul 17, 2015Latest activity Jan 3, 2022
Myth-busting the provider-user relationship for digital sequence information

This article has 7 authors:
1. Amber Hartman Scholz
2. Matthias Lange
3. Pia Habekost
4. Paul Oldham
5. Ibon Cancio
6. Guy Cochrane
7. Jens Freitag
Reviewed by GigaScience

This article has 3 evaluationsAppears in 1 listLatest version Dec 1, 2021Latest activity Jan 3, 2022
Species-level resolution of 16S rRNA gene amplicons sequenced through the MinION ^TM portable nanopore sequencer

This article has 3 authors:
1. Alfonso Benítez-Páez
2. Kevin J. Portune
3. Yolanda Sanz
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version Jul 1, 2015Latest activity Jan 3, 2022
A single chromosome assembly of Bacteroides fragilis strain BE1 from Illumina and MinION nanopore sequencing data

This article has 6 authors:
1. Judith Risse
2. Marian Thomson
3. Garry Blakely
4. Georgios Koutsovoulos
5. Mark Blaxter
6. Mick Watson
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version Aug 11, 2015Latest activity Jan 3, 2022
NCBI BLAST + integrated into Galaxy

This article has 5 authors:
1. Peter J. A. Cock
2. John M. Chilton
3. Björn Grüning
4. James E. Johnson
5. Nicola Soranzo
Reviewed by GigaScience

This article has 4 evaluationsAppears in 1 listLatest version Jan 21, 2015Latest activity Jan 3, 2022
ISA API: An open platform for interoperable life science experimental metadata

This article has 20 authors:
1. David Johnson
2. Keeva Cochrane
3. Robert P. Davey
4. Anthony Etuk
5. Alejandra Gonzalez-Beltran
6. Kenneth Haug
7. Massimiliano Izzo
8. Martin Larralde
9. Thomas N. Lawson
10. Alice Minotto
11. Pablo Moreno
12. Venkata Chandrasekhar Nainala
13. Claire O’Donovan
14. Luca Pireddu
15. Pierrick Roger
16. Felix Shaw
17. Christoph Steinbeck
18. Ralf J. M. Weber
19. Susanna-Assunta Sansone
20. Philippe Rocca-Serra
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version Nov 16, 2020Latest activity Jan 3, 2022
RNA-Seq analysis and annotation of a draft blueberry genome assembly identifies candidate genes involved in fruit ripening, biosynthesis of bioactive compounds, and stage-specific alternative splicing

This article has 10 authors:
1. Vikas Gupta
2. April D. Estrada
3. Ivory Blakley
4. Rob Reid
5. Ketan Patel
6. Mason D. Meyer
7. Stig Uggerhøj Andersen
8. Allan F. Brown
9. Mary Ann Lila
10. Ann E. Loraine
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version Oct 8, 2014Latest activity Jan 3, 2022
A reference bacterial genome dataset generated on the MinION™ portable single-molecule nanopore sequencer

This article has 3 authors:
1. Joshua Quick
2. Aaron Quinlan
3. Nicholas J Loman
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version Sep 26, 2014Latest activity Jan 3, 2022
A data repository and analysis framework for spontaneous neural activity recordings in developing retina

This article has 6 authors:
1. Stephen John Eglen
2. Michael Weeks
3. Mark Jessop
4. Jennifer Simonotto
5. Tom Jackson
6. Evelyne Sernagor
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version Nov 15, 2013Latest activity Jan 3, 2022
A high-quality genome and comparison of short- versus long-read transcriptome of the palaearctic duck Aythya fuligula (tufted duck)

This article has 20 authors:
1. Ralf C Mueller
2. Patrik Ellström
3. Kerstin Howe
4. Marcela Uliano-Silva
5. Richard I Kuo
6. Katarzyna Miedzinska
7. Amanda Warr
8. Olivier Fedrigo
9. Bettina Haase
10. Jacquelyn Mountcastle
11. William Chow
12. James Torrance
13. Jonathan M D Wood
14. Josef D Järhult
15. Mahmoud M Naguib
16. Björn Olsen
17. Erich D Jarvis
18. Jacqueline Smith
19. Lél Eöry
20. Robert H S Kraus
Reviewed by GigaScience

This article has 3 evaluationsAppears in 1 listLatest version Dec 1, 2021Latest activity Mar 14, 2022
An overview of the National COVID-19 Chest Imaging Database: data quality and cohort analysis

This article has 16 authors:
1. Dominic Cushnan
2. Oscar Bennett
3. Rosalind Berka
4. Ottavia Bertolli
5. Ashwin Chopra
6. Samie Dorgham
7. Alberto Favaro
8. Tara Ganepola
9. Mark Halling-Brown
10. Gergely Imreh
11. Joseph Jacob
12. Emily Jefferson
13. François Lemarchand
14. Daniel Schofield
15. Jeremy C Wyatt
16. NCCID Collaborative
Reviewed by GigaScience, ScreenIT

This article has 2 evaluationsAppears in 2 listsLatest version Nov 1, 2021Latest activity Nov 24, 2021
Population modeling with machine learning can enhance measures of mental health

This article has 6 authors:
1. Kamalaker Dadi
2. Gaël Varoquaux
3. Josselin Houenou
4. Danilo Bzdok
5. Bertrand Thirion
6. Denis Engemann
Reviewed by GigaScience

This article has 2 evaluationsAppears in 1 listLatest version Oct 1, 2021Latest activity Oct 29, 2021
Detection and characterization of low and high genome coverage regions using an efficient running median and a double threshold approach

This article has 4 authors:
1. Dimitri Desvillechabrol
2. Christiane Bouchier
3. Sean Kennedy
4. Thomas Cokelaer
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version Dec 8, 2016Latest activity Oct 26, 2021
Open Humans: A platform for participant-centered research and personal data exploration

This article has 13 authors:
1. Bastian Greshake Tzovaras
2. Misha Angrist
3. Kevin Arvai
4. Mairi Dulaney
5. Vero Estrada-Galiñanes
6. Beau Gunderson
7. Tim Head
8. Dana Lewis
9. Oded Nov
10. Orit Shaer
11. Athina Tzovara
12. Jason Bobe
13. Mad Price Ball
Reviewed by GigaScience

This article has 2 evaluationsAppears in 1 listLatest version Jun 1, 2019Latest activity Sep 13, 2021
Scalable Analysis of Multi-Modal Biomedical Data

This article has 4 authors:
1. Jaclyn Smith
2. Yao Shi
3. Michael Benedikt
4. Milos Nikolic
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version Dec 15, 2020Latest activity Sep 12, 2021
An efficient and robust laboratory workflow and tetrapod database for larger scale environmental DNA studies

This article has 7 authors:
1. Jan Axtner
2. Alex Crampton-Platt
3. Lisa A Hörig
4. Azlan Mohamed
5. Charles C Y Xu
6. Douglas W Yu
7. Andreas Wilting
Reviewed by GigaScience

This article has 1 evaluationAppears in 1 listLatest version Apr 1, 2019Latest activity Aug 25, 2021

Evaluated articles

Analyzing climate variations on multiple timescales can guide Zika virus response measures

Streaming algorithms for identification of pathogens and antibiotic resistance potential from real-time MinION ^TM sequencing

Quantitative monitoring of nucleotide sequence data from genetic resources in context of their citation in the scientific literature

AGOUTI: improving genome assembly and annotation using transcriptome data

Tools and techniques for computational reproducibility

Myth-busting the provider-user relationship for digital sequence information

Species-level resolution of 16S rRNA gene amplicons sequenced through the MinION ^TM portable nanopore sequencer

A single chromosome assembly of Bacteroides fragilis strain BE1 from Illumina and MinION nanopore sequencing data

NCBI BLAST + integrated into Galaxy

ISA API: An open platform for interoperable life science experimental metadata

RNA-Seq analysis and annotation of a draft blueberry genome assembly identifies candidate genes involved in fruit ripening, biosynthesis of bioactive compounds, and stage-specific alternative splicing

A reference bacterial genome dataset generated on the MinION™ portable single-molecule nanopore sequencer

A data repository and analysis framework for spontaneous neural activity recordings in developing retina

A high-quality genome and comparison of short- versus long-read transcriptome of the palaearctic duck Aythya fuligula (tufted duck)

An overview of the National COVID-19 Chest Imaging Database: data quality and cohort analysis

Population modeling with machine learning can enhance measures of mental health

Detection and characterization of low and high genome coverage regions using an efficient running median and a double threshold approach

Open Humans: A platform for participant-centered research and personal data exploration

Scalable Analysis of Multi-Modal Biomedical Data

An efficient and robust laboratory workflow and tetrapod database for larger scale environmental DNA studies