GigaScience

Latest preprint reviews

1. Myth-busting the provider-user relationship for digital sequence information

   This article has 7 authors:

   1. Amber Hartman Scholz
   2. Matthias Lange
   3. Pia Habekost
   4. Paul Oldham
   5. Ibon Cancio
   6. Guy Cochrane
   7. Jens Freitag

   Reviewed by GigaScience

2. Species-level resolution of 16S rRNA gene amplicons sequenced through the MinION™ portable nanopore sequencer

   This article has 3 authors:

   1. Alfonso Benítez-Páez
   2. Kevin J Portune
   3. Yolanda Sanz

   Reviewed by GigaScience

3. A single chromosome assembly of Bacteroides fragilis strain BE1 from Illumina and MinION nanopore sequencing data

   This article has 7 authors:

   1. Judith Risse
   2. Marian Thomson
   3. Sheila Patrick
   4. Garry Blakely
   5. Georgios Koutsovoulos
   6. Mark Blaxter
   7. Mick Watson

   Reviewed by GigaScience

4. NCBI BLAST+ integrated into Galaxy

   This article has 5 authors:

   1. Peter J. A. Cock
   2. John M. Chilton
   3. Björn Grüning
   4. James E. Johnson
   5. Nicola Soranzo

   Reviewed by GigaScience

5. ISA API: An open platform for interoperable life science experimental metadata

   This article has 21 authors:

   1. David Johnson
   2. Dominique Batista
   3. Keeva Cochrane
   4. Robert P Davey
   5. Anthony Etuk
   6. Alejandra Gonzalez-Beltran
   7. Kenneth Haug
   8. Massimiliano Izzo
   9. Martin Larralde
   10. Thomas N Lawson
   11. Alice Minotto
   12. Pablo Moreno
   13. Venkata Chandrasekhar Nainala
   14. Claire O'Donovan
   15. Luca Pireddu
   16. Pierrick Roger
   17. Felix Shaw
   18. Christoph Steinbeck
   19. Ralf J M Weber
   20. Susanna-Assunta Sansone
   21. Philippe Rocca-Serra

   Reviewed by GigaScience

6. RNA-Seq analysis and annotation of a draft blueberry genome assembly identifies candidate genes involved in fruit ripening, biosynthesis of bioactive compounds, and stage-specific alternative splicing

   This article has 10 authors:

   1. Vikas Gupta
   2. April D Estrada
   3. Ivory Blakley
   4. Rob Reid
   5. Ketan Patel
   6. Mason D Meyer
   7. Stig Uggerhøj Andersen
   8. Allan F Brown
   9. Mary Ann Lila
   10. Ann E Loraine

   Reviewed by GigaScience

7. A reference bacterial genome dataset generated on the MinION™ portable single-molecule nanopore sequencer

   This article has 3 authors:

   1. Joshua Quick
   2. Aaron R Quinlan
   3. Nicholas J Loman

   Reviewed by GigaScience

8. A data repository and analysis framework for spontaneous neural activity recordings in developing retina

   This article has 6 authors:

   1. Stephen John Eglen
   2. Michael Weeks
   3. Mark Jessop
   4. Jennifer Simonotto
   5. Tom Jackson
   6. Evelyne Sernagor

   Reviewed by GigaScience

9. A high-quality genome and comparison of short- versus long-read transcriptome of the palaearctic duck Aythya fuligula (tufted duck)

   This article has 20 authors:

   1. Ralf C Mueller
   2. Patrik Ellström
   3. Kerstin Howe
   4. Marcela Uliano-Silva
   5. Richard I Kuo
   6. Katarzyna Miedzinska
   7. Amanda Warr
   8. Olivier Fedrigo
   9. Bettina Haase
   10. Jacquelyn Mountcastle
   11. William Chow
   12. James Torrance
   13. Jonathan M D Wood
   14. Josef D Järhult
   15. Mahmoud M Naguib
   16. Björn Olsen
   17. Erich D Jarvis
   18. Jacqueline Smith
   19. Lél Eöry
   20. Robert H S Kraus

   Reviewed by GigaScience

10. An overview of the National COVID-19 Chest Imaging Database: data quality and cohort analysis

    This article has 16 authors:

    1. Dominic Cushnan
    2. Oscar Bennett
    3. Rosalind Berka
    4. Ottavia Bertolli
    5. Ashwin Chopra
    6. Samie Dorgham
    7. Alberto Favaro
    8. Tara Ganepola
    9. Mark Halling-Brown
    10. Gergely Imreh
    11. Joseph Jacob
    12. Emily Jefferson
    13. François Lemarchand
    14. Daniel Schofield
    15. Jeremy C Wyatt
    16. NCCID Collaborative

    Reviewed by GigaScience, ScreenIT