GigaScience

Latest preprint reviews

1. iCAVE: an open source tool for visualizing biomolecular networks in 3D, stereoscopic 3D and immersive 3D

   This article has 6 authors:

   1. Vaja Liluashvili
   2. Selim Kalayci
   3. Eugene Fluder
   4. Manda Wilson
   5. Aaron Gabow
   6. Zeynep H. Gümüş

   Reviewed by GigaScience

2. A recurrence-based approach for validating structural variation using long-read sequencing technology

   This article has 3 authors:

   1. Xuefang Zhao
   2. Alexandra M. Weber
   3. Ryan E. Mills

   Reviewed by GigaScience

3. A combined meta-barcoding and shotgun metagenomic analysis of spontaneous wine fermentation

   This article has 4 authors:

   1. Peter R. Sternes
   2. Danna Lee
   3. Dariusz R. Kutyna
   4. Anthony R. Borneman

   Reviewed by GigaScience

4. Multi-locus and long amplicon sequencing approach to study microbial diversity at species level using the MinION™ portable nanopore sequencer

   This article has 2 authors:

   1. Alfonso Benítez-Páez
   2. Yolanda Sanz

   Reviewed by GigaScience

5. 16GT: a fast and sensitive variant caller using a 16-genotype probabilistic model

   This article has 3 authors:

   1. Ruibang Luo
   2. Michael C. Schatz
   3. Steven L. Salzberg

   Reviewed by GigaScience

6. Kronos: a workflow assembler for genome analytics and informatics

   This article has 10 authors:

   1. M. Jafar Taghiyar
   2. Jamie Rosner
   3. Diljot Grewal
   4. Bruno M. Grande
   5. Radhouane Aniba
   6. Jasleen Grewal
   7. Paul C. Boutros
   8. Ryan D. Morin
   9. Ali Bashashati
   10. Sohrab P. Shah

   Reviewed by GigaScience

7. Bio-Docklets: virtualization containers for single-step execution of NGS pipelines

   This article has 5 authors:

   1. Baekdoo Kim
   2. Thahmina Ali
   3. Carlos Lijeron
   4. Enis Afgan
   5. Konstantinos Krampis

   Reviewed by GigaScience

8. GSuite HyperBrowser: integrative analysis of dataset collections across the genome and epigenome

   This article has 25 authors:

   1. Boris Simovski
   2. Daniel Vodák
   3. Sveinung Gundersen
   4. Diana Domanska
   5. Abdulrahman Azab
   6. Lars Holden
   7. Marit Holden
   8. Ivar Grytten
   9. Knut Rand
   10. Finn Drabløs
   11. Morten Johansen
   12. Antonio Mora
   13. Christin Lund-Andersen
   14. Bastian Fromm
   15. Ragnhild Eskeland
   16. Odd Stokke Gabrielsen
   17. Egil Ferkingstad
   18. Sigve Nakken
   19. Mads Bengtsen
   20. Alexander Johan Nederbragt
   21. Hildur Sif Thorarensen
   22. Johannes Andreas Akse
   23. Ingrid Glad
   24. Eivind Hovig
   25. Geir Kjetil Sandve

   Reviewed by GigaScience

9. Enhancing knowledge discovery from cancer genomics data with Galaxy

   This article has 10 authors:

   1. Marco A. Albuquerque
   2. Bruno M. Grande
   3. Elie J. Ritch
   4. Prasath Pararajalingam
   5. Selin Jessa
   6. Martin Krzywinski
   7. Jasleen K. Grewal
   8. Sohrab P. Shah
   9. Paul C. Boutros
   10. Ryan D. Morin

   Reviewed by GigaScience

10. NanoSim: nanopore sequence read simulator based on statistical characterization

    This article has 4 authors:

    1. Chen Yang
    2. Justin Chu
    3. René L Warren
    4. Inanç Birol

    Reviewed by GigaScience