GigaScience

Latest preprint reviews

1. RepeatFiller newly identifies megabases of aligning repetitive sequences and improves annotations of conserved non-exonic elements

   This article has 3 authors:

   1. Ekaterina Osipova
   2. Nikolai Hecker
   3. Michael Hiller

   Reviewed by GigaScience

2. Trochodendron aralioides , the first chromosome-level draft genome in Trochodendrales and a valuable resource for basal eudicot research

   This article has 4 authors:

   1. Joeri S Strijk
   2. Damien D Hinsinger
   3. Fengping Zhang
   4. Kunfang Cao

   Reviewed by GigaScience

3. RootNav 2.0: Deep learning for automatic navigation of complex plant root architectures

   This article has 6 authors:

   1. Robail Yasrab
   2. Jonathan A Atkinson
   3. Darren M Wells
   4. Andrew P French
   5. Tony P Pridmore
   6. Michael P Pound

   Reviewed by GigaScience

4. Evaluation of computational genotyping of structural variation for clinical diagnoses

   This article has 3 authors:

   1. Varuna Chander
   2. Richard A Gibbs
   3. Fritz J Sedlazeck

   Reviewed by GigaScience

5. ascend : R package for analysis of single-cell RNA-seq data

   This article has 7 authors:

   1. Anne Senabouth
   2. Samuel W Lukowski
   3. Jose Alquicira Hernandez
   4. Stacey B Andersen
   5. Xin Mei
   6. Quan H Nguyen
   7. Joseph E Powell

   Reviewed by GigaScience

6. Identifying, understanding, and correcting technical artifacts on the sex chromosomes in next-generation sequencing data

   This article has 8 authors:

   1. Timothy H Webster
   2. Madeline Couse
   3. Bruno M Grande
   4. Eric Karlins
   5. Tanya N Phung
   6. Phillip A Richmond
   7. Whitney Whitford
   8. Melissa A Wilson

   Reviewed by GigaScience

7. CWL-Airflow: a lightweight pipeline manager supporting Common Workflow Language

   This article has 3 authors:

   1. Michael Kotliar
   2. Andrey V Kartashov
   3. Artem Barski

   Reviewed by GigaScience

8. A chromosome-scale assembly of the major African malaria vector Anopheles funestus

   This article has 7 authors:

   1. Jay Ghurye
   2. Sergey Koren
   3. Scott T Small
   4. Seth Redmond
   5. Paul Howell
   6. Adam M Phillippy
   7. Nora J Besansky

   Reviewed by GigaScience

9. GenPipes: an open-source framework for distributed and scalable genomic analyses

   This article has 23 authors:

   1. Mathieu Bourgey
   2. Rola Dali
   3. Robert Eveleigh
   4. Kuang Chung Chen
   5. Louis Letourneau
   6. Joel Fillon
   7. Marc Michaud
   8. Maxime Caron
   9. Johanna Sandoval
   10. Francois Lefebvre
   11. Gary Leveque
   12. Eloi Mercier
   13. David Bujold
   14. Pascale Marquis
   15. Patrick Tran Van
   16. David Anderson de Lima Morais
   17. Julien Tremblay
   18. Xiaojian Shao
   19. Edouard Henrion
   20. Emmanuel Gonzalez
   21. Pierre-Olivier Quirion
   22. Bryan Caron
   23. Guillaume Bourque

   Reviewed by GigaScience

10. TuBA: Tunable biclustering algorithm reveals clinically relevant tumor transcriptional profiles in breast cancer

    This article has 3 authors:

    1. Amartya Singh
    2. Gyan Bhanot
    3. Hossein Khiabanian

    Reviewed by GigaScience