GigaScience

Latest preprint reviews

1. Duphold: scalable, depth-based annotation and curation of high-confidence structural variant calls

   This article has 2 authors:

   1. Brent S Pedersen
   2. Aaron R Quinlan

   Reviewed by GigaScience

2. Accumulating computational resource usage of genomic data analysis workflow to optimize cloud computing instance selection

   This article has 3 authors:

   1. Tazro Ohta
   2. Tomoya Tanjo
   3. Osamu Ogasawara

   Reviewed by GigaScience

3. A multi-omics data simulator for complex disease studies and its application to evaluate multi-omics data analysis methods for disease classification

   This article has 2 authors:

   1. Ren-Hua Chung
   2. Chen-Yu Kang

   Reviewed by GigaScience

4. SciPipe: A workflow library for agile development of complex and dynamic bioinformatics pipelines

   This article has 4 authors:

   1. Samuel Lampa
   2. Martin Dahlö
   3. Jonathan Alvarsson
   4. Ola Spjuth

   Reviewed by GigaScience

5. A critical comparison of technologies for a plant genome sequencing project

   This article has 12 authors:

   1. Pirita Paajanen
   2. George Kettleborough
   3. Elena López-Girona
   4. Michael Giolai
   5. Darren Heavens
   6. David Baker
   7. Ashleigh Lister
   8. Gail Wilde
   9. Ingo Hein
   10. Iain Macaulay
   11. Glenn J. Bryan
   12. Matthew D. Clark

   Reviewed by GigaScience

6. Comparative Genomics and Genome Evolution in birds-of-paradise

   This article has 12 authors:

   1. Stefan Prost
   2. Ellie E. Armstrong
   3. Johan Nylander
   4. Gregg W.C. Thomas
   5. Alexander Suh
   6. Bent Petersen
   7. Love Dalen
   8. Brett Benz
   9. Mozes P.K. Blom
   10. Eleftheria Palkopoulou
   11. Per G. P. Ericson
   12. Martin Irestedt

   Reviewed by GigaScience

7. Integrating genomic resources to present full gene and putative promoter capture probe sets for bread wheat

   This article has 10 authors:

   1. Laura-Jayne Gardiner
   2. Thomas Brabbs
   3. Alina Akhunov
   4. Katherine Jordan
   5. Hikmet Budak
   6. Todd Richmond
   7. Sukhwinder Singh
   8. Leah Catchpole
   9. Eduard Akhunov
   10. Anthony Hall

   Reviewed by GigaScience

8. Modelling genotypes in their microenvironment to predict single- and multi-cellular behaviour

   This article has 5 authors:

   1. Dimitrios Voukantsis
   2. Kenneth Kahn
   3. Martin Hadley
   4. Rowan Wilson
   5. Francesca M. Buffa

   Reviewed by GigaScience

9. CropSight: a scalable and open-source information management system for distributed plant phenotyping and IoT-based crop management

   This article has 6 authors:

   1. Daniel Reynolds
   2. Joshua Ball
   3. Alan Bauer
   4. Robert Davey
   5. Simon Griffiths
   6. Ji Zhou

   Reviewed by GigaScience

10. MetaPGN: a pipeline for construction and graphical visualization of annotated pangenome networks

    This article has 13 authors:

    1. Ye Peng
    2. Shanmei Tang
    3. Dan Wang
    4. Huanzi Zhong
    5. Huijue Jia
    6. Xianghang Cai
    7. Zhaoxi Zhang
    8. Minfeng Xiao
    9. Huanming Yang
    10. Jian Wang
    11. Karsten Kristiansen
    12. Xun Xu
    13. Junhua Li

    Reviewed by GigaScience