Arcadia Science

Latest preprint reviews

1. Lysosomal Expansion Compartments Mediate Zinc and Copper Homeostasis in Caenorhabditis elegans

   This article has 17 authors:

   1. Joy R. Armendariz
   2. Sean Teng
   3. Camdyn Rakow
   4. Raquel Herrera
   5. Samuel Herrera
   6. Moshe T. Gordon
   7. Si Chen
   8. Stefan Vogt
   9. Hanwenheng Liu
   10. Makena Jarvis
   11. Katryna Reese
   12. Aidan T. Pezacki
   13. Christopher J. Chang
   14. Byung-Eun Kim
   15. Daniel L. Schneider
   16. Adelita D. Mendoza
   17. Kerry Kornfeld

   Reviewed by Arcadia Science

2. LabOS: The AI-XR Co-Scientist That Sees and Works With Humans

   This article has 33 authors:

   1. Le Cong
   2. David Smerkous
   3. Xiaotong Wang
   4. Di Yin
   5. Zaixi Zhang
   6. Ruofan Jin
   7. Yinkai Wang
   8. Michal Gerasimiuk
   9. Ravi K. Dinesh
   10. Alex Smerkous
   11. Lihan Shi
   12. Joy Zheng
   13. Ian Lam
   14. Xuekun Wu
   15. Shilong Liu
   16. Peishan Li
   17. Yi Zhu
   18. Ning Zhao
   19. Meenal Parakh
   20. Simran Serrao
   21. Imran A. Mohammad
   22. Chao-Yeh Chen
   23. Xiufeng Xie
   24. Tiffany Chen
   25. David Weinstein
   26. Greg Barbone
   27. Belgin Caglar
   28. John B. Sunwoo
   29. Fuxin Li
   30. Jia Deng
   31. Joseph C. Wu
   32. Sanfeng Wu
   33. Mengdi Wang

   Reviewed by Arcadia Science

3. Minimal Amino Acid Alphabet for Protein Design

   This article has 6 authors:

   1. Karel Půbal
   2. Kseniia Kushnir
   3. Vojtěch Spiwok
   4. Karolína Loužecká
   5. Vladimír Setnička
   6. Petra Lipovová

   Reviewed by Arcadia Science

4. BOTany Methods: Accessible Automation for Plant Synthetic Biology

   This article has 4 authors:

   1. Moni Qiande
   2. Abigail Lin
   3. Lianna Larson
   4. Cătălin Voiniciuc

   Reviewed by Arcadia Science

5. Quantifying Behavioral Structure and Persistence in Open-Field Assays Using Entropy and Spectral Metrics

   This article has 4 authors:

   1. Sihak Lee
   2. Daniel J. Choi
   3. Soonwook Choi
   4. Zhanyan Fu

   Reviewed by Arcadia Science

6. Adversarial Sequence Mutations in AlphaFold and ESMFold Reveal Nonphysical Structural Invariance, Confidence Failures, and Concerns for Protein Design

   This article has 3 authors:

   1. Jonathan Feldman
   2. Maximilian Brogi
   3. Jeffrey Skolnick

   Reviewed by Arcadia Science

7. Evolutionary adaptation proceeds through a small number of phenotypic modules

   This article has 5 authors:

   1. Mohammad Hossein Donyavi
   2. Reza Ghelich
   3. Kara Schmidlin
   4. Grant Kinsler
   5. Kerry Geiler-Samerotte

   Reviewed by Arcadia Science

8. ESMDisPred: A Structure-Aware CNN-Transformer Architecture for Intrinsically Disordered Protein Prediction

   This article has 4 authors:

   1. Md Wasi Ul Kabir
   2. Ayon Dey
   3. Farzeen Nafees
   4. Md Tamjidul Hoque

   Reviewed by Arcadia Science

9. A Multi-modal LLM for Dynamic Protein-Ligand Interactions and Generative Molecular Design

   This article has 2 authors:

   1. Haoran Jing
   2. Yutong Miao

   Reviewed by Arcadia Science

10. RAG-ESM: Improving pretrained protein language models via sequence retrieval

    This article has 2 authors:

    1. Damiano Sgarbossa
    2. Anne-Florence Bitbol

    Reviewed by Arcadia Science