Arcadia Science

Latest preprint reviews

1. The evolution of reduced facilitation in a four-species bacterial community

   This article has 6 authors:

   1. Philippe Piccardi
   2. Eric Ulrich
   3. Marc Garcia-Garcerà
   4. Rita Di Martino
   5. Samuele E A Testa
   6. Sara Mitri

   Reviewed by Arcadia Science

2. AlphaFind: Discover structure similarity across the entire known proteome

   This article has 11 authors:

   1. David Prochazka
   2. Terezia Slaninakova
   3. Jaroslav Olha
   4. Adrian Rosinec
   5. Katarina Gresova
   6. Miriama Janosova
   7. Jakub Cillik
   8. Jana Porubska
   9. Radka Svobodova
   10. Vlastislav Dohnal
   11. Matej Antol

   Reviewed by Arcadia Science

3. Drosophila epidermal cells are intrinsically mechanosensitive and modulate nociceptive behavioral outputs

   This article has 15 authors:

   1. Jiro Yoshino
   2. Sonali S Mali
   3. Claire R Williams
   4. Takeshi Morita
   5. Chloe E Emerson
   6. Christopher J Arp
   7. Sophie E Miller
   8. Chang Yin
   9. Lydia Thé
   10. Chikayo Hemmi
   11. Mana Motoyoshi
   12. Kenichi Ishii
   13. Kazuo Emoto
   14. Diana M Bautista
   15. Jay Z Parrish

   This article has been curated by 1 group:

   • Curated by eLife

     eLife Assessment

     This is important work and provides a significant advance in our understanding of mechanosensation in the epidermis. The evidence presented is convincing and, barring a few minor weaknesses, strongly implicates activation of epidermal cells and store-operated calcium entry in the activation of nociceptive neurons innervating that tissue. This work will be of broad interest to neurobiologists, epithelial cell biologists, and mechanobiologists.

   Reviewed by eLife, Arcadia Science

4. Novel misos shape distinct microbial ecologies: opportunities for flavourful sustainable food innovation

   This article has 7 authors:

   1. Caroline Isabel Kothe
   2. Christian Carøe
   3. Florent Mazel
   4. David Zilber
   5. Pablo Cruz-Morales
   6. Nacer Mohellibi
   7. Joshua D. Evans

   Reviewed by Arcadia Science

5. Design and construction towards a pan-microbial toolkit

   This article has 7 authors:

   1. Charlie Gilbert
   2. Alexander Crits-Christoph
   3. Elise Ledieu-Dherbécourt
   4. Shinyoung Clair Kang
   5. Stephanie L. Brumwell
   6. Henry H. Lee
   7. Nili Ostrov

   Reviewed by Arcadia Science

6. Lytic transglycosylase repertoire diversity enables daughter cell separation and antibiotic resistance in Escherichia coli under acidic stress

   This article has 4 authors:

   1. Chang-Ro Lee
   2. Ji Eun Son
   3. Si Hyoung Park
   4. Umji Choi

   Reviewed by Arcadia Science

7. Gene expression differences associated with intrinsic hindfoot muscle loss in the jerboa, Jaculus jaculus

   This article has 6 authors:

   1. Mai P. Tran
   2. Daniel Ochoa Reyes
   3. Alexander J. Weitzel
   4. Aditya Saxena
   5. Michael Hiller
   6. Kimberly L. Cooper

   Reviewed by Arcadia Science

8. Universal Cell Embeddings: A Foundation Model for Cell Biology

   This article has 7 authors:

   1. Yanay Rosen
   2. Yusuf Roohani
   3. Ayush Agrawal
   4. Leon Samotorcan
   5. Tabula Sapiens Consortium
   6. Stephen R. Quake
   7. Jure Leskovec

   Reviewed by Arcadia Science

9. Evaluating the Utilities of Foundation Models in Single-cell Data Analysis

   This article has 5 authors:

   1. Tianyu Liu
   2. Kexing Li
   3. Yuge Wang
   4. Hongyu Li
   5. Hongyu Zhao

   Reviewed by Arcadia Science

10. A Critical Reexamination of Recovered SARS-CoV-2 Sequencing Data

    This article has 2 authors:

    1. Florence Débarre
    2. Zach Hensel

    Reviewed by Arcadia Science