Arcadia Science

Latest preprint reviews

1. Towards a Cytometry Foundation Model: Interpretable Sample-level Predictive Modelling via Pretrained Transformers

   This article has 4 authors:

   1. Zixin Zhuang
   2. Benjamin S. Mashford
   3. Liang Zheng
   4. T. Daniel Andrews

   Reviewed by Arcadia Science

2. Benchmarking Agentic Large Language Models for Complex Protein-Set Functional Annotation

   This article has 1 author:

   1. Xiaoyu Zhang

   Reviewed by Arcadia Science

3. Enabling the prediction of phage receptor specificity from genome data

   This article has 14 authors:

   1. Lucas Moriniere
   2. Avery J. C. Noonan
   3. Alexey Kazakov
   4. Melina Pena
   5. Madeline Svab
   6. Edwin O. Rivera-Lopez
   7. Flavien Maucourt
   8. Milo S. Johnson
   9. Simon Roux
   10. Britt Koskella
   11. Adam M. Deutschbauer
   12. Edward G. Dudley
   13. Vivek K. Mutalik
   14. Adam P. Arkin

   Reviewed by Arcadia Science

4. Pseudomonas aeruginosa deploys competitor-specific antagonistic strategies

   This article has 3 authors:

   1. Ziyang Chen
   2. Ned S. Wingreen
   3. Zemer Gitai

   Reviewed by Arcadia Science

5. Label-free assessment of pre-implantation embryo quality by the Fluorescence Lifetime Imaging Microscopy (FLIM)-phasor approach

   This article has 6 authors:

   1. Ning Ma
   2. Nabora Reyes de Mochel
   3. Paula Duyen Pham
   4. Tae Yeon Yoo
   5. Ken W. Y. Cho
   6. Michelle A. Digman

   Reviewed by Arcadia Science

6. Cellulose Synthase Complexes and Remorins Mediate Stress Resilience Through Cell Wall-Plasma Membrane Attachments

   This article has 13 authors:

   1. Yue Rui
   2. Magda Zaoralova
   3. William P. Dwyer
   4. Andres V. Reyes
   5. Tarabryn S. Grismer
   6. Nikolaj B. Abel
   7. Dharanidaran Jayachandran
   8. Shishir P.S. Chundawat
   9. Thomas Ott
   10. Joseph J. Kieber
   11. Peter Dahlberg
   12. Shou-Ling Xu
   13. Jose Ramon Dinneny

   Reviewed by Arcadia Science

7. A global metagenomic atlas uncovers ubiquitous biosynthetic potential linked to adaptation in extreme environments

   This article has 11 authors:

   1. Rubing Du
   2. Ruolin He
   3. Qi Qian
   4. Zhen Li
   5. Qiyong Tang
   6. Zhidong Zhang
   7. Xinming Xu
   8. Haoran Peng
   9. Jun Liu
   10. Marnix H. Medema
   11. Qing Xu

   Reviewed by Arcadia Science

8. BioReason-Pro: Advancing Protein Function Prediction with Multimodal Biological Reasoning

   This article has 34 authors:

   1. Adibvafa Fallahpour
   2. Arman Seyed-Ahmadi
   3. Parsa Idehpour
   4. Omar Ibrahim
   5. Purav Gupta
   6. Jack Naimer
   7. Kevin Zhu
   8. Arnav Shah
   9. Shihao Ma
   10. Abhinav Adduri
   11. Talu Güloglu
   12. Nuo Liu
   13. Haotian Cui
   14. Arihant Jain
   15. Max de Castro
   16. Amirfaham Fallahpour
   17. Antonio Cembellin-Prieto
   18. John S. Stiles
   19. Filip Nemčko
   20. Alexander A. Nevue
   21. Hyungseok C. Moon
   22. Lucas Sosnick
   23. Olivia Markham
   24. Haonan Duan
   25. Michelle Y. Y. Lee
   26. Andrea F. M. Salvador
   27. Chris J. Maddison
   28. Christoph A. Thaiss
   29. Chiara Ricci-Tam
   30. Brian S. Plosky
   31. Dave P. Burke
   32. Patrick D. Hsu
   33. Hani Goodarzi
   34. Bo Wang

   Reviewed by Arcadia Science

9. Multi-agent reasoning enables predictive design of living materials

   This article has 20 authors:

   1. Yewei Xiao
   2. Xi Zeng
   3. Zhaoxiang Yang
   4. Junwei Gu
   5. Yujie Wang
   6. Huilin Wen
   7. Mingdong Chen
   8. Yanhong Lu
   9. Zhipeng Huang
   10. Junwei Hu
   11. Jiaojiao Liu
   12. Chengxiang Sha
   13. Jinhui Xie
   14. Huan Li
   15. Xiang Zhu
   16. Shenchi Zheng
   17. Weijie Zong
   18. Ying Xu
   19. Fei Li
   20. Ziyi Yu

   Reviewed by Arcadia Science

10. Starvation-induced autophagy occurs independently of the ATG1 complex in Chlamydomonas

    This article has 7 authors:

    1. Yong Zou
    2. Yixin Wu
    3. Simon Stael
    4. Panagiotis N. Moschou
    5. Xiaohong Zhuang
    6. Elena A. Minina
    7. Peter V. Bozhkov

    Reviewed by Arcadia Science