Latest preprint reviews

1. Genes in Humans and Mice: Insights from Deep learning of 777K Bulk Transcriptomes

   This article has 6 authors:

   1. Zheng Su
   2. Mingyan Fang
   3. Andrei Smolnikov
   4. Fatemeh Vafaee
   5. Marcel E. Dinger
   6. Emily C. Oates

   Reviewed by Arcadia Science

2. An evolutionary cell biology perspective into the diverging mechanisms of clathrin-mediated endocytosis in dikarya fungi

   This article has 4 authors:

   1. Andrea Picco
   2. Christopher P. Toret
   3. Anne-Sophie Rivier-Cordey
   4. Marko Kaksonen

   Reviewed by Arcadia Science

3. The Evolutionary Origins and Ancestral Features of Septins

   This article has 6 authors:

   1. Samed Delic
   2. Brent Shuman
   3. Shoken Lee
   4. Shirin Bahmanyar
   5. Michelle Momany
   6. Masayuki Onishi

   Reviewed by Arcadia Science

4. Machine Learning Assisted Spectral Fingerprinting for Immune Cell Phenotyping

   This article has 5 authors:

   1. Aceer Nadeem
   2. Sarah Lyons
   3. Aidan Kindopp
   4. Amanda Jamieson
   5. Daniel Roxbury

   Reviewed by Arcadia Science

5. Evaluating generalizability of artificial intelligence models for molecular datasets

   This article has 6 authors:

   1. Yasha Ektefaie
   2. Andrew Shen
   3. Daria Bykova
   4. Maximillian Marin
   5. Marinka Zitnik
   6. Maha Farhat

   Reviewed by Arcadia Science

6. Assessment of Gene Set Enrichment Analysis using curated RNA-seq-based benchmarks

   This article has 2 authors:

   1. Julián Candia
   2. Luigi Ferrucci

   Reviewed by Arcadia Science

7. Lightning Pose: improved animal pose estimation via semi-supervised learning, Bayesian ensembling, and cloud-native open-source tools

   This article has 21 authors:

   1. Dan Biderman
   2. Matthew R Whiteway
   3. Cole Hurwitz
   4. Nicholas Greenspan
   5. Robert S Lee
   6. Ankit Vishnubhotla
   7. Richard Warren
   8. Federico Pedraja
   9. Dillon Noone
   10. Michael Schartner
   11. Julia M Huntenburg
   12. Anup Khanal
   13. Guido T Meijer
   14. Jean-Paul Noel
   15. Alejandro Pan-Vazquez
   16. Karolina Z Socha
   17. Anne E Urai
   18. The International Brain Laboratory
   19. John P Cunningham
   20. Nathaniel B Sawtell
   21. Liam Paninski

   Reviewed by Arcadia Science

8. Evolutionary rescue of spherical mreB deletion mutants of the rod-shape bacterium Pseudomonas fluorescens SBW25

   This article has 11 authors:

   1. P. Richard J. Yulo
   2. Nicolas Desprat
   3. Monica L. Gerth
   4. Barbara Ritzl-Rinkenberger
   5. Andrew D. Farr
   6. Yunhao Liu
   7. Xue-Xian Zhang
   8. Michael Miller
   9. Felipe Cava
   10. Paul B. Rainey
   11. Heather L. Hendrickson

   This article has been curated by 1 group:

   • Curated by eLife

     eLife assessment

     This valuable study combines evolution experiments with molecular and genetic techniques to study how a genetic lesion in MreB that causes rod-shape cells to become spherical, with concomitant deleterious fitness effects, can be rescued by natural selection. The results are convincing, although the statistical analyses and figure presentation could be improved, and the concrete contribution of the paper and how it relates to previous literature clarified.

   Reviewed by eLife, Arcadia Science

9. Predicting microbial growth conditions from amino acid composition

   This article has 6 authors:

   1. Tyler P. Barnum
   2. Alexander Crits-Christoph
   3. Michael Molla
   4. Paul Carini
   5. Henry H. Lee
   6. Nili Ostrov

   Reviewed by Arcadia Science

10. Dueling Endogenous Viral-Like Sequences Control Synaptic Plasticity

    This article has 9 authors:

    1. P. Githure M’Angale
    2. Adrienne Lemieux
    3. Yumeng Liu
    4. Jasmine Graslie
    5. Shuhao Wang
    6. Alfred Simkin
    7. Vivian Budnik
    8. Brian A. Kelch
    9. Travis Thomson

    Reviewed by Arcadia Science