Arcadia Science

Latest preprint reviews

1. The structure of an ancient genotype–phenotype map shaped the functional evolution of a protein family

   This article has 3 authors:

   1. Santiago Herrera-Álvarez
   2. Jaeda E. J. Patton
   3. Joseph W. Thornton

   Reviewed by Arcadia Science

2. ESM-Effect: An Effective and Efficient Fine-Tuning Framework towards accurate prediction of Mutation’s Functional Effect

   This article has 2 authors:

   1. Moritz Glaser
   2. Johannes Brägelmann

   Reviewed by Arcadia Science

3. Anti-citrullinated protein antibodies arise during affinity maturation of germline antibodies to carbamylated proteins in rheumatoid arthritis

   This article has 5 authors:

   1. Marta Escarra-Senmarti
   2. Michael Chungyoun
   3. Dylan Ferris
   4. Jeffrey J. Gray
   5. Felipe Andrade

   Reviewed by Arcadia Science

4. CellPhePy: A python implementation of the CellPhe toolkit for automated cell phenotyping from microscopy time‐lapse videos

   This article has 9 authors:

   1. Laura Wiggins
   2. Stuart Lacy
   3. Graeme Park
   4. Joanne Marrison
   5. Ben Powell
   6. Beth Cimini
   7. Peter O'Toole
   8. Julie Wilson
   9. William J. Brackenbury

   Reviewed by Arcadia Science

5. Development of antigen-dextramers for detection and evaluation of CAR T cells

   This article has 8 authors:

   1. Rasmus U. W. Friis
   2. Maria Ormhøj
   3. Cecilie S. Krüger-Jensen
   4. Markus Barden
   5. Keerthana Ramanathan
   6. Mikkel R. Hansen
   7. Hinrich Abken
   8. Sine R. Hadrup

   Reviewed by Arcadia Science

6. Lab-in-the-loop therapeutic antibody design with deep learning

   This article has 64 authors:

   1. Nathan C. Frey
   2. Isidro Hötzel
   3. Samuel D. Stanton
   4. Ryan Kelly
   5. Robert G. Alberstein
   6. Emily K. Makowski
   7. Karolis Martinkus
   8. Daniel Berenberg
   9. Jack Bevers
   10. Tyler Bryson
   11. Pamela Chan
   12. Yongmei Chen
   13. Alicja Czubaty
   14. Tamica D’Souza
   15. Henri Dwyer
   16. Anna Dziewulska
   17. James W. Fairman
   18. Allen Goodman
   19. Jennifer Hofmann
   20. Henry Isaacson
   21. Aya Ismail
   22. Samantha James
   23. Taylor Joren
   24. Simon Kelow
   25. James R. Kiefer
   26. Matthieu Kirchmeyer
   27. Joseph Kleinhenz
   28. James T. Koerber
   29. Julien Lafrance-Vanasse
   30. Andrew Leaver-Fay
   31. Jae Hyeon Lee
   32. Edith Lee
   33. Donald Lee
   34. Wei-Ching Liang
   35. Joshua Yao-Yu Lin
   36. Sidney Lisanza
   37. Andreas Loukas
   38. Jan Ludwiczak
   39. Sai Pooja Mahajan
   40. Omar Mahmood
   41. Homa Mohammadi-Peyhani
   42. Santrupti Nerli
   43. Ji Won Park
   44. Jaewoo Park
   45. Stephen Ra
   46. Sarah Robinson
   47. Saeed Saremi
   48. Franziska Seeger
   49. Imee Sinha
   50. Anna M. Sokol
   51. Natasa Tagasovska
   52. Hao To
   53. Edward Wagstaff
   54. Amy Wang
   55. Andrew M. Watkins
   56. Blair Wilson
   57. Shuang Wu
   58. Karina Zadorozhny
   59. John Marioni
   60. Aviv Regev
   61. Yan Wu
   62. Kyunghyun Cho
   63. Richard Bonneau
   64. Vladimir Gligorijević

   Reviewed by Arcadia Science

7. Teach your microscope how to print: Low-cost and rapid-iteration microfabrication for biology

   This article has 12 authors:

   1. Lucien Hinderling
   2. Remo Hadorn
   3. Moritz Kwasny
   4. Joël Frei
   5. Benjamin Grädel
   6. Sacha Psalmon
   7. Yannick Blum
   8. Rémi Berthoz
   9. Alex Landolt
   10. Benjamin D. Towbin
   11. Daniel Riveline
   12. Olivier Pertz

   Reviewed by Arcadia Science

8. Arp2/3-mediated bidirectional actin assembly by SPIN90 dimers in metazoans

   This article has 6 authors:

   1. Tianyang Liu
   2. Luyan Cao
   3. Miroslav Mladenov
   4. Guillaume Romet-Lemonne
   5. Michael Way
   6. Carolyn A. Moores

   Reviewed by Arcadia Science

9. Systematic comparison of Generative AI-Protein Models reveals fundamental differences between structural and sequence-based approaches.

   This article has 6 authors:

   1. Alexander J Barnett
   2. Rajendra KC
   3. Pratikshya Pandey
   4. Pamodha Somasiri
   5. Kirsten A Fairfax
   6. Alex W Hewitt

   Reviewed by Arcadia Science

10. Discovery of antibiotics in the archaeome using deep learning

    This article has 3 authors:

    1. Marcelo D. T. Torres
    2. Fangping Wan
    3. Cesar de la Fuente-Nunez

    Reviewed by Arcadia Science