Genomics

  1. Draft genome of the reindeer (Rangifer tarandus)

    1. Zhipeng Li
    2. Zeshan Lin
    3. Hengxing Ba
    4. Lei Chen
    5. Yongzhi Yang
    6. Kun Wang
    7. Qiang Qiu
    8. Wen Wang
    9. Guangyu Li

    Reviewed by GigaScience

    1 evaluationAppears in 1 listLatest version Latest activity

  2. The first near-complete assembly of the hexaploid bread wheat genome, Triticum aestivum

    1. Aleksey V Zimin
    2. Daniela Puiu
    3. Richard Hall
    4. Sarah Kingan
    5. Bernardo J Clavijo
    6. Steven L Salzberg

    Reviewed by GigaScience

    1 evaluationAppears in 1 listLatest version Latest activity

  3. Indexcov: fast coverage quality control for whole-genome sequencing

    1. Brent S Pedersen
    2. Ryan L Collins
    3. Michael E Talkowski
    4. Aaron R Quinlan

    Reviewed by GigaScience

    1 evaluationAppears in 1 listLatest version Latest activity

  4. GSuite HyperBrowser: integrative analysis of dataset collections across the genome and epigenome

    1. Boris Simovski
    2. Daniel Vodák
    3. Sveinung Gundersen
    4. Diana Domanska
    5. Abdulrahman Azab
    6. Lars Holden
    7. Marit Holden
    8. Ivar Grytten
    9. Knut Rand
    10. Finn Drabløs
    11. Morten Johansen
    12. Antonio Mora
    13. Christin Lund-Andersen
    14. Bastian Fromm
    15. Ragnhild Eskeland
    16. Odd Stokke Gabrielsen
    17. Egil Ferkingstad
    18. Sigve Nakken
    19. Mads Bengtsen
    20. Alexander Johan Nederbragt
    21. Hildur Sif Thorarensen
    22. Johannes Andreas Akse
    23. Ingrid Glad
    24. Eivind Hovig
    25. Geir Kjetil Sandve

    Reviewed by GigaScience

    1 evaluationAppears in 1 listLatest version Latest activity

  5. Enhancing knowledge discovery from cancer genomics data with Galaxy

    1. Marco A. Albuquerque
    2. Bruno M. Grande
    3. Elie J. Ritch
    4. Prasath Pararajalingam
    5. Selin Jessa
    6. Martin Krzywinski
    7. Jasleen K. Grewal
    8. Sohrab P. Shah
    9. Paul C. Boutros
    10. Ryan D. Morin

    Reviewed by GigaScience

    1 evaluationAppears in 1 listLatest version Latest activity

  6. A single chromosome assembly of Bacteroides fragilis strain BE1 from Illumina and MinION nanopore sequencing data

    1. Judith Risse
    2. Marian Thomson
    3. Sheila Patrick
    4. Garry Blakely
    5. Georgios Koutsovoulos
    6. Mark Blaxter
    7. Mick Watson

    Reviewed by GigaScience

    1 evaluationAppears in 1 listLatest version Latest activity

  7. RNA-Seq analysis and annotation of a draft blueberry genome assembly identifies candidate genes involved in fruit ripening, biosynthesis of bioactive compounds, and stage-specific alternative splicing

    1. Vikas Gupta
    2. April D Estrada
    3. Ivory Blakley
    4. Rob Reid
    5. Ketan Patel
    6. Mason D Meyer
    7. Stig Uggerhøj Andersen
    8. Allan F Brown
    9. Mary Ann Lila
    10. Ann E Loraine

    Reviewed by GigaScience

    1 evaluationAppears in 1 listLatest version Latest activity

  8. A reference bacterial genome dataset generated on the MinION™ portable single-molecule nanopore sequencer

    1. Joshua Quick
    2. Aaron R Quinlan
    3. Nicholas J Loman

    Reviewed by GigaScience

    1 evaluationAppears in 1 listLatest version Latest activity

  9. A high-quality genome and comparison of short- versus long-read transcriptome of the palaearctic duck Aythya fuligula (tufted duck)

    1. Ralf C Mueller
    2. Patrik Ellström
    3. Kerstin Howe
    4. Marcela Uliano-Silva
    5. Richard I Kuo
    6. Katarzyna Miedzinska
    7. Amanda Warr
    8. Olivier Fedrigo
    9. Bettina Haase
    10. Jacquelyn Mountcastle
    11. William Chow
    12. James Torrance
    13. Jonathan M D Wood
    14. Josef D Järhult
    15. Mahmoud M Naguib
    16. Björn Olsen
    17. Erich D Jarvis
    18. Jacqueline Smith
    19. Lél Eöry
    20. Robert H S Kraus

    Reviewed by GigaScience

    3 evaluationsAppears in 1 listLatest version Latest activity

  10. Comparison of long-read methods for sequencing and assembly of a plant genome

    1. Valentine Murigneux
    2. Subash Kumar Rai
    3. Agnelo Furtado
    4. Timothy J C Bruxner
    5. Wei Tian
    6. Ivon Harliwong
    7. Hanmin Wei
    8. Bicheng Yang
    9. Qianyu Ye
    10. Ellis Anderson
    11. Qing Mao
    12. Radoje Drmanac
    13. Ou Wang
    14. Brock A Peters
    15. Mengyang Xu
    16. Pei Wu
    17. Bruce Topp
    18. Lachlan J M Coin
    19. Robert J Henry

    Reviewed by GigaScience

    3 evaluationsAppears in 1 listLatest version Latest activity
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