1. Convergent organization of aberrant MYB complex controls oncogenic gene expression in acute myeloid leukemia

    This article has 14 authors:
    1. Sumiko Takao
    2. Lauren Forbes
    3. Masahiro Uni
    4. Shuyuan Cheng
    5. Jose Mario Bello Pineda
    6. Yusuke Tarumoto
    7. Paolo Cifani
    8. Gerard Minuesa
    9. Celine Chen
    10. Michael G Kharas
    11. Robert K Bradley
    12. Christopher R Vakoc
    13. Richard P Koche
    14. Alex Kentsis

    Reviewed by Review Commons

    This article has 4 evaluationsAppears in 1 listLatest version Latest activity
  2. Gene expression has more power for predicting in vitro cancer cell vulnerabilities than genomics

    This article has 9 authors:
    1. Joshua M. Dempster
    2. John M. Krill-Burger
    3. James M. McFarland
    4. Allison Warren
    5. Jesse S. Boehm
    6. Francisca Vazquez
    7. William C. Hahn
    8. Todd R. Golub
    9. Aviad Tsherniak
    This article has been curated by 1 group:
    • Curated by eLife

      Summary: The authors propose a new approach to the derivation of cancer signatures and compare the relative impact of gene expression data with respect to other variables, particularly SVN and CVNs. The simplicity of the idea and of the technical approach, to the point of singling out a single gene predictive value, is a positive aspect. There are also critical aspects that will require substantial revision including the underlying influence of tissue specific genes. Overall, the paper provides a good basis for the generation of specific hypotheses that can be followed by additional validation studies at the computational and/or experimental level.

    Reviewed by eLife

    This article has 4 evaluationsAppears in 1 listLatest version Latest activity
  3. Tumor-derived extracellular vesicles regulate tumor-infiltrating regulatory T cells via the inhibitory immunoreceptor CD300a

    This article has 6 authors:
    1. Yuta Nakazawa
    2. Nanako Nishiyama
    3. Hitoshi Koizumi
    4. Kazumasa Kanemaru
    5. Chigusa Nakahashi-Oda
    6. Akira Shibuya

    Reviewed by eLife

    This article has 1 evaluationAppears in 1 listLatest version Latest activity
  4. The origins and consequences of UPF1 variants in pancreatic adenosquamous carcinoma

    This article has 8 authors:
    1. Jacob T Polaski
    2. Dylan B Udy
    3. Luisa F Escobar-Hoyos
    4. Gokce Askan
    5. Steven D Leach
    6. Andrea Ventura
    7. Ram Kannan
    8. Robert K Bradley

    Reviewed by eLife

    This article has 4 evaluationsAppears in 1 listLatest version Latest activity
  5. A statistical framework for assessing pharmacological response and biomarkers using uncertainty estimates

    This article has 10 authors:
    1. Dennis Wang
    2. James Hensman
    3. Ginte Kutkaite
    4. Tzen S. Toh
    5. GDSC Screening Team
    6. Jonathan R Dry
    7. Julio Saez-Rodriguez
    8. Mathew J. Garnett
    9. Michael P. Menden
    10. Frank Dondelinger

    Reviewed by eLife

    This article has 3 evaluationsAppears in 1 listLatest version Latest activity
  6. Phenotypic plasticity underlies local invasion and distant metastasis in colon cancer

    This article has 18 authors:
    1. Andrea Sacchetti
    2. Miriam Teeuwssen
    3. Mathijs Verhagen
    4. Rosalie Joosten
    5. Tong Xu
    6. Roberto Stabile
    7. Berdine van der Steen
    8. Martin M Watson
    9. Alem Gusinac
    10. Won Kyu Kim
    11. Inge Ubink
    12. Harmen JG Van de Werken
    13. Arianna Fumagalli
    14. Madelon Paauwe
    15. Jacco Van Rheenen
    16. Owen J Sansom
    17. Onno Kranenburg
    18. Riccardo Fodde

    Reviewed by eLife

    This article has 5 evaluationsAppears in 1 listLatest version Latest activity
  7. Multiomics integrative analysis reveals antagonistic roles of CBX2 and CBX7 in metabolic reprogramming of breast cancer

    This article has 7 authors:
    1. Mohammad Askandar Iqbal
    2. Shumaila Siddiqui
    3. Asad Ur Rehman
    4. Farid Ahmad Siddiqui
    5. Prithvi Singh
    6. Bhupender Kumar
    7. Daman Saluja

    Reviewed by eLife

    This article has 4 evaluationsAppears in 1 listLatest version Latest activity
  8. HIP1 mediates oncogenic transformation and cancer progression through STAT3 signalling

    This article has 10 authors:
    1. Roheet Bantval Rao
    2. Antonio Ramos-Montoya
    3. Helen Scott
    4. Lorraine Berry
    5. Stefanie Reichelt
    6. Stewart MacArthur
    7. Roslin Russell
    8. David E Neal
    9. Emma Evergren
    10. Ian G Mills

    Reviewed by eLife

    This article has 4 evaluationsAppears in 1 listLatest version Latest activity
  9. Ral GTPases promote metastasis by controlling biogenesis and organ colonization of exosomes

    This article has 25 authors:
    1. S Ghoroghi
    2. B Mary
    3. A Larnicol
    4. A Klein
    5. N Osmani
    6. I Busnelli
    7. F Delalande
    8. N Paul
    9. S Halary
    10. F Gros
    11. L Fouillen
    12. AM Haeberle
    13. C Royer
    14. C Spiegelhalter
    15. G André-Grégoire
    16. K Murphy
    17. P Timpson
    18. R Carapito
    19. M Blot-Chabaud
    20. J Gavard
    21. C Carapito
    22. N Vitale
    23. O Lefebvre
    24. JG Goetz
    25. V Hyenne

    Reviewed by eLife

    This article has 1 evaluationAppears in 1 listLatest version Latest activity
  10. Landscape of oncoviral genotype and co-infection via human papilloma and hepatitis B viral tumor in situ profiling

    This article has 7 authors:
    1. Adrian Bubie
    2. Fabien Zoulim
    3. Barbara Testoni
    4. Brett Miles
    5. Marshall Posner
    6. Augusto Villanueva
    7. Bojan Losic

    Reviewed by eLife

    This article has 4 evaluationsAppears in 1 listLatest version Latest activity
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