Cancer Biology

Drug-Induced p53 Activation Limits Pancreatic Cancer Initiation

1. Jennifer J Twardowski
2. Thomas I Heist
3. Zamira Guerra Soares
4. Emily S Berry
5. Luis I Ruffolo
6. Christoph Pröschel
7. Stephano S Mello

Reviewed by Review Commons

Single-cell dissection of prognostic architecture and immunotherapy response in Helicobacter pylori infection associated gastric cancer

1. Xin Zhang
2. Guangyu Zhang
3. Shuli Sang
4. Yang Fei
5. Xiaopeng Cao
6. Wenge Song
7. Feide Liu
8. Jinze Che
9. Haoxia Tao
10. Hongwei Wang
11. Lihua Zhang
12. Yiyan Guan
13. Shipeng Rong
14. Lijuan Pei
15. Sheng Yao
16. Yanchun Wang
17. Min Zhang
18. Chunjie Liu

• Curated by eLife

  eLife Assessment

  This study presents a valuable description of the cellular and transcriptional landscape of the tumor microenvironment in 27 gastric cancer (GC) patients based on their H. pylori status (HpGC, ex-HpGC, non-HpGC). The single-cell RNA sequencing dataset and computational analysis are convincing and provide a starting point that is of value for understanding H pylori-associated GC cell type composition, cell transitions, and mechanisms of response to therapy. The section correlating immunotherapy outcomes with GC cell type compositions from bulk RNAseq would have been strengthened by further comparing H. pylori GC versus non H. pylori GC.

Reviewed by eLife

Phosphodiesterase 1A physically interacts with YTHDF2 and reinforces the progression of non-small cell lung cancer

1. Chong Zhang
2. Zuoyan Zhang
3. Yueyi Wu
4. Yuchen Wu
5. Jing Cheng
6. Kaizhi Luo
7. Zhidi Li
8. Manman Zhang
9. Jian Wang
10. Yangling Li

• Curated by eLife

  eLife Assessment

  This manuscript provides valuable mechanistic insight into NSCLC progression, both in terms of tumour metastasis and the development of chemoresistance. The authors draw upon a range of techniques and assays and the evidence shown is solid and has been strengthened by incorporation of suggestions by the two reviewers. The work presented will be of interest to cancer biologists and more broadly to those interested in NSCLC translational studies.

Reviewed by eLife

Single-Cell Atlas of AML Reveals Age-Related Gene Regulatory Networks in t(8;21) AML

1. Jessica Whittle
2. Stefan Meyer
3. Georges Lacaud
4. Syed Murtuza Baker
5. Mudassar Iqbal

• Curated by eLife

  eLife Assessment

  This manuscript provides a single-cell transcriptomic atlas for AML (222 samples comprising 748,679 cells) integrating data from multiple studies. They use this dataset to investigate t(8;21) AML, and they reconstruct the Gene Regulatory Network and enhancer Gene Regulatory Network, which allowed identification of interesting targets. This aggregation is useful and can help infer differences in genetic regulatory modules based on the age of disease onset, which may help explain age-related variations in prognosis and disease development. However, result interpretations and the motivation and critical analysis of the applied computational methods are incomplete, and the statistical analyses lack control experiments and should be improved to avoid potential selection bias in the later analyses.

Reviewed by eLife

TopBP1 biomolecular condensates: a new therapeutic target in advanced-stage colorectal cancer

1. Laura Morano
2. Nadia Vezzio-Vié
3. Adam Aissanou
4. Tom Egger
5. Antoine Aze
6. Solène Fiachetti
7. Benoît Bordignon
8. Cédric Hassen-Khodja
9. Hervé Seitz
10. Louis-Antoine Milazzo
11. Véronique Garambois
12. Laurent Chaloin
13. Nathalie Bonnefoy
14. Céline Gongora
15. Angelos Constantinou
16. Jihane Basbous

• Curated by eLife

  eLife Assessment

  This valuable study demonstrates that the GSK-3 inhibitor AZD2858 inhibits the formation of TOPBP1 condensates and hence DNA damage responses in colorectal cancer cells. The evidence supporting the claims of the authors is convincing, although uncovering how this drug blocks bio-condensate formation would have strengthened the study. The work will be of interest to cancer researchers searching for synergistic drug combination strategies.

  [Editors' note: this paper was reviewed by Review Commons.]

Reviewed by eLife

Inhibition of p38-MK2 pathway enhances the efficacy of microtubule inhibitors in breast cancer cells

1. Yu-Chia Chen
2. Mamoru Takada
3. Aerica Nagornyuk
4. Muhan Yu
5. Hideyuki Yamada
6. Takeshi Nagashima
7. Masayuki Ohtsuka
8. Jennifer G DeLuca
9. Steven M Markus
10. Motoki Takaku
11. Aussie Suzuki

• Curated by eLife

  eLife Assessment

  This study provides valuable findings that MK2 inhibitor CMPD1 can inhibit the growth, migration and invasion of breast cancer cells both in vitro and in vivo. The evidence supporting the claims of the authors is solid, although the detailed molecular mechanism and additional animal experiments would strengthen the paper. This study will be of interest to the breast cancer field.

Reviewed by eLife

Integrated Analysis of Single-Cell and Bulk RNA-Seq Data reveals that Ferroptosis-Related Genes Mediated the Tumor Microenvironment predicts Prognosis, and guides Drug Selection in Triple-Negative Breast Cancer

1. Xuantong Gong
2. Lishuang Gu
3. Di Yang
4. Yu He
5. Qian Li
6. Hao Qin
7. Yong Wang

• Curated by eLife

  eLife Assessment

  This study presents a useful finding for the ferroptosis-mediated tumor microenvironment (TME) in triple-negative breast cancer (TNBC) using public single-cell RNA sequencing (scRNA-seq) and bulk RNA sequencing data. The data were collected and analyzed using solid and validated methodology and can be used as a starting point for functional studies of TME in TNBC. The work will be of interest to medical biologists working in the field of TNBC.

Reviewed by eLife

Mitochondrial ETF insufficiency drives neoplastic growth by selectively optimizing cancer bioenergetics

1. David Papadopoli
2. Ranveer Palia
3. Predrag Jovanovic
4. Sébastien Tabariès
5. Emma Ciccolini
6. Valerie Sabourin
7. Sebastian Igelmann
8. Shannon McLaughlan
9. Lesley Zhan
10. HaEun Kim
11. Nabila Chekkal
12. Krzysztof J Szkop
13. Thierry Bertomeu
14. Jibin Zeng
15. Julia Vassalakis
16. Farzaneh Afzali
17. Slim Mzoughi
18. Ernesto Guccione
19. Mike Tyers
20. Daina Avizonis
21. Ola Larsson
22. Lynne-Marie Postovit
23. Sergej Djuranovic
24. Josie Ursini-Siegel
25. Peter M Siegel
26. Michael Pollak
27. Ivan Topisirovic

• Curated by eLife

  eLife Assessment

  The authors present an important set of data implicating ETFDH as an epigenetically suppressed gene in cancer with tumor suppressive functions. The evidence is solid, with the authors demonstrating that ETFDH suppression results in accumulation of amino acids that impact metabolism via hyperactive mTORC1.

Reviewed by eLife

Repression of the Wnt pathway effector TCF7L2 reverses lethal cachexia in mice with intestinal cancers

1. Mei Ling Leong
2. Christiane Ruedl
3. Klaus Karjalainen

• Curated by eLife

  eLife Assessment

  In this valuable study, the authors demonstrate that TCF7L2 plays a role in the pathogenesis of cachexia in a mouse model of GI cancer. The results are solid, although future studies will need further mechanistic analyses. These data will be interesting to cancer biologists, especially those trying to understand late-stage complications such as cachexia and wasting, a major cause of cancer morbidity and mortality.

Reviewed by eLife

Human RAP2A Homolog of the Drosophila Asymmetric Cell Division Regulator Rap2l Targets the Stemness of Glioblastoma Stem Cells

1. Maribel Franco
2. Ricardo Gargini
3. Víctor M Barberá
4. Miguel Saceda
5. Ana Carmena

• Curated by eLife

  eLife Assessment

  This useful study explores the role of RAP2A in asymmetric cell division (ACD) regulation in glioblastoma stem cells (GSCs), drawing parallels to Drosophila ACD mechanisms and proposing that an imbalance toward symmetric divisions drives tumor progression. While findings on RAP2A's role in GSC expansion are promising, the study is nevertheless incomplete. Limitations include the lack of comprehensive GBM subtype analysis, insufficient mechanistic validation, and reliance on neurosphere models without in vivo confirmation. Addressing those gaps is necessary to substantiate the study's claims.

Reviewed by eLife