1. A mechano-osmotic feedback couples cell volume to the rate of cell deformation

    This article has 16 authors:
    1. Larisa Venkova
    2. Amit Singh Vishen
    3. Sergio Lembo
    4. Nishit Srivastava
    5. Baptiste Duchamp
    6. Artur Ruppel
    7. Alice Williart
    8. Stéphane Vassilopoulos
    9. Alexandre Deslys
    10. Juan Manuel Garcia Arcos
    11. Alba Diz-Muñoz
    12. Martial Balland
    13. Jean-François Joanny
    14. Damien Cuvelier
    15. Pierre Sens
    16. Matthieu Piel
    This article has been curated by 1 group:
    • Curated by eLife

      Evaluation Summary:

      The paper by Venkova et al. is a comprehensive study of mammalian cell volume dynamics during the common cellular process of adhesion and spreading on a flat substrate, osmotic changes, and mechanical confinement. The paper reveals a complex interplay between cell water/ion regulation, cytoskeletal processes, and mechanical deformation of the cell. The topic is important in cell physiology and should be of considerable interest to cell biologists, mechanobiologists and biophysicists.

      (This preprint has been reviewed by eLife. We include the public reviews from the reviewers here; the authors also receive private feedback with suggested changes to the manuscript. Reviewer #1 agreed to share their name with the authors.)

    Reviewed by eLife

    This article has 5 evaluationsAppears in 1 listLatest version Latest activity
  2. The pathogen-encoded signalling receptor Tir exploits host-like intrinsic disorder for infection

    This article has 12 authors:
    1. Marta F. M. Vieira
    2. Guillem Hernandez
    3. Qiyun Zhong
    4. Miguel Arbesú
    5. Tiago Veloso
    6. Tiago Gomes
    7. Maria L. Martins
    8. Hugo Monteiro
    9. Carlos Frazão
    10. Gad Frankel
    11. Andreas Zanzoni
    12. Tiago N. Cordeiro

    Reviewed by Review Commons

    This article has 4 evaluationsAppears in 1 listLatest version Latest activity
  3. How Does Temperature Affect the Dynamics of SARS-CoV-2 M Proteins? Insights from Molecular Dynamics Simulations

    This article has 3 authors:
    1. Soumya Lipsa Rath
    2. Madhusmita Tripathy
    3. Nabanita Mandal

    Reviewed by ScreenIT

    This article has 1 evaluationAppears in 1 listLatest version Latest activity
  4. Dynamic allostery highlights the evolutionary differences between the CoV-1 and CoV-2 main proteases

    This article has 3 authors:
    1. Paul Campitelli
    2. Jin Lu
    3. S. Banu Ozkan

    Reviewed by ScreenIT

    This article has 1 evaluationAppears in 1 listLatest version Latest activity
  5. Nanofluidic chips for cryo-EM structure determination from picoliter sample volumes

    This article has 6 authors:
    1. Stefan T Huber
    2. Edin Sarajlic
    3. Roeland Huijink
    4. Felix Weis
    5. Wiel H Evers
    6. Arjen J Jakobi
    This article has been curated by 1 group:
    • Curated by eLife

      Evaluation Summary:

      Sample preparation for single-particle electron cryo-microscopy (cryo-EM) remains a bottleneck of this technique. The sample ice thickness cannot be accurately controlled, molecules may display strongly preferred orientations that make more elaborate data collection schemes necessary, and the sample may degrade at the air-water interface before it is finally frozen. In their pioneering work, the authors describe a prototype of a new microfluidic device that addresses some of these problems, including a refreshingly objective and critical discussion about the pros and cons of this novel approach. While some development will be required for this method to become mainstream, it has the potential to become a powerful alternative to the conventional workflow of single-particle cryo-EM, enabling full automation and making sample preparation highly reproducible.

      (This preprint has been reviewed by eLife. We include the public reviews from the reviewers here; the authors also receive private feedback with suggested changes to the manuscript. Reviewer #1, Reviewer #2 and Reviewer #3 agreed to share their name with the authors.)

    Reviewed by eLife

    This article has 4 evaluationsAppears in 2 listsLatest version Latest activity
  6. Mechanistic Insights into the Effects of Key Mutations on SARS-CoV-2 RBD-ACE2 Binding

    This article has 6 authors:
    1. Abhishek Aggarwal
    2. Supriyo Naskar
    3. Nikhil Maroli
    4. Biswajit Gorai
    5. Narendra M. Dixit
    6. Prabal K. Maiti

    Reviewed by ScreenIT

    This article has 1 evaluationAppears in 1 listLatest version Latest activity
  7. An empirical energy landscape reveals mechanism of proteasome in polypeptide translocation

    This article has 4 authors:
    1. Rui Fang
    2. Jason Hon
    3. Mengying Zhou
    4. Ying Lu
    This article has been curated by 1 group:
    • Curated by eLife

      Evaluation Summary:

      AAA+ ATPases consume chemical energy in form of ATP to catalyze essential cellular reactions. Here, computational and biochemical approaches are used to model how the six subunits of the AAA+ ATPase Rpt1-6 coordinate their enzymatic activity with each other to exert unidirectional pulling forces on target polypeptide chains that promote protein unfolding. Although the technical aspects of the work are sometimes difficult to follow, the findings indicate that the order in which ATPase active sites fire is generally sequential, much like a rotary engine. The system can tolerate "misfires" - instances in which a subunit fails to hydrolyze ATP - by skipping the problematic subunit. The work should appeal to the broad AAA+ community and researchers trying to understand the biophysical principles by which complex biological machines operate.

      (This preprint has been reviewed by eLife. We include the public reviews from the reviewers here; the authors also receive private feedback with suggested changes to the manuscript. Reviewer #3 agreed to share their name with the authors.)

    Reviewed by eLife

    This article has 4 evaluationsAppears in 1 listLatest version Latest activity
  8. Supramolecular Organization of SARS-CoV and SARS-CoV-2 Virions Revealed by Coarse-Grained Models of Intact Virus Envelopes

    This article has 3 authors:
    1. Beibei Wang
    2. Changqing Zhong
    3. D. Peter Tieleman

    Reviewed by ScreenIT

    This article has 1 evaluationAppears in 1 listLatest version Latest activity
  9. Fast ATP-Dependent Subunit Rotation in Reconstituted F o F 1 -ATP Synthase Trapped in Solution

    This article has 2 authors:
    1. Thomas Heitkamp
    2. Michael Börsch
    This article has been curated by 1 group:
    • Curated by Biophysics Colab

      Endorsement statement (21 September 2021)

      The preprint by Heitkamp and Börsch describes visualization of the fast ATP-dependent subunit rotation in reconstituted FoF1-ATP synthase using single-molecule FRET techniques. Using a highly innovative method for trapping single molecules, the authors were able to see the static and dynamic disorder of enzymes in solution, not possible in previous studies. The work makes important contributions to both understanding the structural dynamics of FoF1-ATP synthase and the development of methodologies to study single-molecule dynamics of other proteins in solution.

      (This endorsement refers to version 5 of this preprint, which was peer reviewed by Biophysics Colab.)

    Reviewed by Biophysics Colab

    This article has 2 evaluationsAppears in 4 listsLatest version Latest activity
  10. Dual domain recognition determines SARS-CoV-2 PLpro selectivity for human ISG15 and K48-linked di-ubiquitin

    This article has 13 authors:
    1. Pawel M. Wydorski
    2. Jerzy Osipiuk
    3. Benjamin T. Lanham
    4. Christine Tesar
    5. Michael Endres
    6. Elizabeth Engle
    7. Robert Jedrzejczak
    8. Vishruth Mullapudi
    9. Karolina Michalska
    10. Krzysztof Fidelis
    11. David Fushman
    12. Andrzej Joachimiak
    13. Lukasz A. Joachimiak

    Reviewed by ScreenIT

    This article has 1 evaluationAppears in 1 listLatest version Latest activity
Previous Page 55 of 90 Next