1. MB-GAN: Microbiome Simulation via Generative Adversarial Network

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    2. Shuang Jiang
    3. Lin Xu
    4. Guanghua Xiao
    5. Yang Xie
    6. Dajiang J Liu
    7. Qiwei Li
    8. Xiaowei Zhan

    Reviewed by GigaScience

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  2. Lilikoi V2.0: a deep learning–enabled, personalized pathway-based R package for diagnosis and prognosis predictions using metabolomics data

    This article has 6 authors:
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    2. Yu Liu
    3. Zhijie Ren
    4. Yuheng Du
    5. Qianhui Huang
    6. Lana X Garmire

    Reviewed by GigaScience

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  3. Understanding the impact of preprocessing pipelines on neuroimaging cortical surface analyses

    This article has 13 authors:
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    2. Amadou Barry
    3. Erin W Dickie
    4. Shawn T Brown
    5. Gabriel A Devenyi
    6. Koji Hatano
    7. Elizabeth DuPre
    8. Alain Dagher
    9. Mallar Chakravarty
    10. Celia M T Greenwood
    11. Bratislav Misic
    12. David N Kennedy
    13. Jean-Baptiste Poline

    Reviewed by GigaScience

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  4. Streamlining data-intensive biology with workflow systems

    This article has 8 authors:
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    2. Phillip T Brooks†
    3. Luiz Irber†
    4. Shannon E K Joslin†
    5. Charles M Reid†
    6. Camille Scott†
    7. C Titus Brown
    8. N Tessa Pierce-Ward

    Reviewed by GigaScience

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  5. BiG-SLiCE: A highly scalable tool maps the diversity of 1.2 million biosynthetic gene clusters

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    2. Justin J J van der Hooft
    3. Dick de Ridder
    4. Marnix H Medema

    Reviewed by GigaScience

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  6. Tool recommender system in Galaxy using deep learning

    This article has 4 authors:
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    2. Helena Rasche
    3. Björn Grüning
    4. Rolf Backofen

    Reviewed by GigaScience

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  7. SoupX removes ambient RNA contamination from droplet-based single-cell RNA sequencing data

    This article has 2 authors:
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    2. Sam Behjati

    Reviewed by GigaScience

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  8. DrivAER: Identification of driving transcriptional programs in single-cell RNA sequencing data

    This article has 3 authors:
    1. Lukas M Simon
    2. Fangfang Yan
    3. Zhongming Zhao

    Reviewed by GigaScience

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  9. iGenomics: Comprehensive DNA sequence analysis on your Smartphone

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    2. Bin Zhou
    3. Elodie Ghedin
    4. Michael C Schatz

    Reviewed by GigaScience

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  10. GigaSOM.jl: High-performance clustering and visualization of huge cytometry datasets

    This article has 9 authors:
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    2. Oliver Hunewald
    3. Laurent Heirendt
    4. Vasco Verissimo
    5. Jiří Vondrášek
    6. Venkata P Satagopam
    7. Reinhard Schneider
    8. Christophe Trefois
    9. Markus Ollert

    Reviewed by GigaScience

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