Molecular Characterization of 𝘝π˜ͺ𝘣𝘳π˜ͺ𝘰 𝘀𝘩𝘰𝘭𝘦𝘳𝘒𝘦 Outbreak Isolates from Western India

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Abstract

_Vibrio cholerae_ isolates obtained from fecal samples referred in an outbreak of acute watery diarrhea in Rahude village in Nashik district of Maharashtra, India were characterized. The five culture-confirmed _Vibrio cholerae_ isolates were subjected to molecular and phylogenetic analysis. The PCR and sequencing results of _ctxB_, _rstA_, _rstB_ and _tcpA_ genes confirmed that the Nashik _V_._cholerae_ strain belonged to subtype O1 Haitian-type strain of _ctxB_7 genotype. Moreover, the phylogenetic analysis of _tcpA_ gene suggested that the Nashik strain is closely related to the newly discovered polymyxin B sensitive strain. This supports the recent finding on the prevalence of polymyxin B sensitive strain in India. The mutation in _tcpA_ protein was mapped to the Ξ±Ξ²-loop region, which plays a role in pili formation as well as in interaction of pili to the local environment.

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