Arcadia Science is a science company that shares open research publications and requests community feedback. To contribute to the ecosystem of open review, our scientists make public comments on public products. Our scientists comment modularly, annotating preprints with specific comments on the areas that best align with their expertise.

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Latest preprint reviews

  1. Assessment of Gene Set Enrichment Analysis using curated RNA-seq-based benchmarks

    1. Julián Candia
    2. Luigi Ferrucci

    Reviewed by Arcadia Science

    12 evaluationsAppears in 1 listLatest version Latest activity

  2. Lightning Pose: improved animal pose estimation via semi-supervised learning, Bayesian ensembling and cloud-native open-source tools

    1. Dan Biderman
    2. Matthew R. Whiteway
    3. Cole Hurwitz
    4. Nicholas Greenspan
    5. Robert S. Lee
    6. Ankit Vishnubhotla
    7. Richard Warren
    8. Federico Pedraja
    9. Dillon Noone
    10. Michael M. Schartner
    11. Julia M. Huntenburg
    12. Anup Khanal
    13. Guido T. Meijer
    14. Jean-Paul Noel
    15. Alejandro Pan-Vazquez
    16. Karolina Z. Socha
    17. Anne E. Urai
    18. The International Brain Laboratory
    19. Larry Abbot
    20. Luigi Acerbi
    21. Valeria Aguillon-Rodriguez
    22. Mandana Ahmadi
    23. Jaweria Amjad
    24. Dora Angelaki
    25. Jaime Arlandis
    26. Zoe C. Ashwood
    27. Kush Banga
    28. Hailey Barrell
    29. Hannah M. Bayer
    30. Brandon Benson
    31. Julius Benson
    32. Jai Bhagat
    33. Dan Birman
    34. Niccolò Bonacchi
    35. Kcenia Bougrova
    36. Julien Boussard
    37. Sebastian A. Bruijns
    38. E. Kelly Buchanan
    39. Robert Campbell
    40. Matteo Carandini
    41. Joana A. Catarino
    42. Fanny Cazettes
    43. Gaelle A. Chapuis
    44. Anne K. Churchland
    45. Yang Dan
    46. Felicia Davatolhagh
    47. Peter Dayan
    48. Sophie Denève
    49. Eric E. J. DeWitt
    50. Ling Liang Dong
    51. Tatiana Engel
    52. Michele Fabbri
    53. Mayo Faulkner
    54. Robert Fetcho
    55. Ila Fiete
    56. Charles Findling
    57. Laura Freitas-Silva
    58. Surya Ganguli
    59. Berk Gercek
    60. Naureen Ghani
    61. Ivan Gordeliy
    62. Laura M. Haetzel
    63. Kenneth D. Harris
    64. Michael Hausser
    65. Naoki Hiratani
    66. Sonja Hofer
    67. Fei Hu
    68. Felix Huber
    69. Cole Hurwitz
    70. Anup Khanal
    71. Christopher S. Krasniak
    72. Sanjukta Krishnagopal
    73. Michael Krumin
    74. Debottam Kundu
    75. Agnès Landemard
    76. Christopher Langdon
    77. Christopher Langfield
    78. Inês Laranjeira
    79. Peter Latham
    80. Petrina Lau
    81. Hyun Dong Lee
    82. Ari Liu
    83. Zachary F. Mainen
    84. Amalia Makri-Cottington
    85. Hernando Martinez-Vergara
    86. Brenna McMannon
    87. Isaiah McRoberts
    88. Guido T. Meijer
    89. Maxwell Melin
    90. Leenoy Meshulam
    91. Kim Miller
    92. Nathaniel J. Miska
    93. Catalin Mitelut
    94. Zeinab Mohammadi
    95. Thomas Mrsic-Flogel
    96. Masayoshi Murakami
    97. Jean-Paul Noel
    98. Kai Nylund
    99. Farideh Oloomi
    100. Alejandro Pan-Vazquez
    101. Liam Paninski
    102. Alberto Pezzotta
    103. Samuel Picard
    104. Jonathan W. Pillow
    105. Alexandre Pouget
    106. Florian Rau
    107. Cyrille Rossant
    108. Noam Roth
    109. Nicholas A. Roy
    110. Kamron Saniee
    111. Rylan Schaeffer
    112. Michael M. Schartner
    113. Yanliang Shi
    114. Carolina Soares
    115. Karolina Z. Socha
    116. Cristian Soitu
    117. Nicholas A. Steinmetz
    118. Karel Svoboda
    119. Marsa Taheri
    120. Charline Tessereau
    121. Anne E. Urai
    122. Erdem Varol
    123. Miles J. Wells
    124. Steven J. West
    125. Matthew R. Whiteway
    126. Charles Windolf
    127. Olivier Winter
    128. Ilana Witten
    129. Lauren E. Wool
    130. Zekai Xu
    131. Han Yu
    132. Anthony M. Zador
    133. Yizi Zhang
    134. John P. Cunningham
    135. Nathaniel B. Sawtell
    136. Liam Paninski

    Reviewed by Arcadia Science

    1 evaluationAppears in 1 listLatest version Latest activity

  3. Evolutionary rescue of spherical mreB deletion mutants of the rod-shape bacterium Pseudomonas fluorescens SBW25

    1. Paul Richard J Yulo
    2. Nicolas Desprat
    3. Monica L Gerth
    4. Barbara Ritzl-Rinkenberger
    5. Andrew D Farr
    6. Yunhao Liu
    7. Xue-Xian Zhang
    8. Michael Miller
    9. Felipe Cava
    10. Paul B Rainey
    11. Heather L Hendrickson

    • Curated by eLife

      eLife Assessment

      This important study combines convincing evolution experiments with molecular and genetic techniques to study how a genetic lesion in MreB that causes rod-shaped cells to become spherical, with concomitant deleterious fitness effects, can be rescued by natural selection. The detailed mechanistic investigation increases our understanding of how mreB contributes to cell wall synthesis and shows how compensatory mutations may reestablish its homogeneity.

    Reviewed by eLife, Arcadia Science

    15 evaluationsAppears in 2 listsLatest version Latest activity

  4. Predicting microbial growth conditions from amino acid composition

    1. Tyler P. Barnum
    2. Alexander Crits-Christoph
    3. Michael Molla
    4. Paul Carini
    5. Henry H. Lee
    6. Nili Ostrov

    Reviewed by Arcadia Science

    6 evaluationsAppears in 1 listLatest version Latest activity

  5. Dueling Endogenous Viral-Like Sequences Control Synaptic Plasticity

    1. P. Githure M’Angale
    2. Adrienne Lemieux
    3. Yumeng Liu
    4. Jasmine Graslie
    5. Shuhao Wang
    6. Alfred Simkin
    7. Vivian Budnik
    8. Brian A. Kelch
    9. Travis Thomson

    Reviewed by Arcadia Science

    2 evaluationsAppears in 1 listLatest version Latest activity

  6. The Diverse Evolutionary Histories of Domesticated Metaviral Capsid Genes in Mammals

    1. William S Henriques
    2. Janet M Young
    3. Artem Nemudryi
    4. Anna Nemudraia
    5. Blake Wiedenheft
    6. Harmit S Malik

    Reviewed by Arcadia Science

    6 evaluationsAppears in 1 listLatest version Latest activity

  7. Environmentally regulated clonal-aggregative multicellularity in a choanoflagellate

    1. Núria Ros-Rocher
    2. Josean Reyes-Rivera
    3. Uzuki Horo
    4. Chantal Combredet
    5. Yeganeh Foroughijabbari
    6. Ben T. Larson
    7. Maxwell C. Coyle
    8. Erik A.T. Houtepen
    9. Mark J. A. Vermeij
    10. Jacob L. Steenwyk
    11. Thibaut Brunet

    Reviewed by Arcadia Science

    8 evaluationsAppears in 1 listLatest version Latest activity

  8. Preeclampsia in mice carrying fetuses with APOL1 risk variants

    1. Teruhiko Yoshida
    2. Khun Zaw Latt
    3. Shashi Shrivastav
    4. Huiyan Lu
    5. Kimberly J. Reidy
    6. Jennifer R. Charlton
    7. Yongmei Zhao
    8. Cheryl A. Winkler
    9. Sandra E. Reznik
    10. Avi Z. Rosenberg
    11. Jeffrey B. Kopp

    Reviewed by Arcadia Science

    11 evaluationsAppears in 1 listLatest version Latest activity

  9. Mu opioid receptors gate the locus coeruleus pain generator

    1. Makenzie R. Norris
    2. Chao-Cheng Kuo
    3. Samantha S. Dunn
    4. Jenny R. Kim
    5. Léa J. Becker
    6. Gustavo Borges
    7. Loc V. Thang
    8. Kyle E. Parker
    9. Jordan G. McCall

    Reviewed by Arcadia Science

    4 evaluationsAppears in 1 listLatest version Latest activity

  10. Microglia contact cerebral vasculature through gaps between astrocyte endfeet

    1. Gary P Morris
    2. Catherine G Foster
    3. Brad A Sutherland
    4. Søren Grubb

    Reviewed by Arcadia Science

    3 evaluationsAppears in 1 listLatest version Latest activity
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